RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	DOPEY1	Q5JWR5	2465 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	USH2A	O75445	5202 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	TG	P01266	2768 aa		-0.52	□□□□□ -2.49
RAP1B-231	ENST00000544639	LOC730098	B7Z3J9	87 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	APOC4-APOC2	K7ER74	178 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	PIN1P1	O15428	100 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	IL5	P05113	134 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	SPINK8	P0C7L1	97 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	SPRR1A	P35321	89 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	MT4	P47944	62 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639		Q5VSD8	79 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	VWF	P04275	2813 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	ATR	Q13535	2644 aa		-0.53	□□□□□ -2.49
RAP1B-231	ENST00000544639	PKHD1	P08F94	4074 aa		-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	EP300	Q09472	2414 aa	Predicted RBP	-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	WNK1	Q9H4A3	2382 aa		-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	TRAV22	A0A0B4J277	110 aa		-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	PIP	P12273	146 aa	Predicted RBP	-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	RRAS2	P62070	204 aa	Predicted RBP	-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	ZNF818P	Q6ZRF7	136 aa		-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	BIVM-ERCC5	R4GMW8	1640 aa		-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	SETD2	Q9BYW2	2564 aa	Predicted RBP	-0.54	□□□□□ -2.5
RAP1B-231	ENST00000544639	DAPK1	P53355	1430 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	PPRC1	Q5VV67	1664 aa	Known RBP	-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639		K7EQZ3	153 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	CBLN1	P23435	193 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPTSSB	Q8NFR3	76 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	MXRA5	Q9NR99	2828 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	FLG	P20930	4061 aa	Predicted RBP	-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	FAT2	Q9NYQ8	4349 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	HIVEP1	P15822	2718 aa		-0.55	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPTA1	P02549	2419 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	EPG5	Q9HCE0	2579 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	HYDIN	Q4G0P3	5121 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639		K7ERU9	68 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	RBM3	P98179	157 aa	Known RBP	-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	SCIMP	Q6UWF3	145 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	BAGE3	Q86Y29	109 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPTSSA	Q969W0	71 aa		-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	CNOT1	A5YKK6	2376 aa	Known RBP	-0.56	□□□□□ -2.5
RAP1B-231	ENST00000544639	IFT172	Q9UG01	1749 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	USP9Y	O00507	2555 aa	Predicted RBP	-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	CHD8	Q9HCK8	2581 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	FAM92A	A1XBS5	289 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	NPFF	O15130	113 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	LZIC	Q8WZA0	190 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	UBR4	Q5T4S7	5183 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	GVINP1	Q7Z2Y8	2422 aa		-0.57	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPTBN1	Q01082	2364 aa	Known RBP	-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	FXYD6-FXYD2	A0A087WZ82	144 aa		-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	NDUFB6	O95139	128 aa		-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPRR2A	P35326	72 aa		-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	LINC00312	Q9Y6C7	94 aa		-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	EPPK1	P58107	5090 aa	Known RBP	-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	HECTD1	Q9ULT8	2610 aa		-0.58	□□□□□ -2.5
RAP1B-231	ENST00000544639	CSPG4	Q6UVK1	2322 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	BCL9L	Q86UU0	1499 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	SNCG	O76070	127 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	SMIM6	P0DI80	62 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	HAMP	P81172	84 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	S100A7L2	Q5SY68	101 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPAG11A	Q6PDA7	123 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	SPCS1	Q9Y6A9	102 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	FHAD1	B1AJZ9	1412 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	C10orf71	Q711Q0	1435 aa		-0.59	□□□□□ -2.5
RAP1B-231	ENST00000544639	SVEP1	Q4LDE5	3571 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	BCE1	O60756	84 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	SPRR2E	P22531	72 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	CCL8	P80075	99 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	KRTAP6-2	Q3LI66	62 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	CFAP126	Q5VTH2	177 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	TSTD1	Q8NFU3	115 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	LRRC37A3	O60309	1634 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	RYR3	Q15413	4870 aa		-0.6	□□□□□ -2.51
RAP1B-231	ENST00000544639	GUCA1A	P43080	201 aa	Predicted RBP	-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	KLK9	Q2XQG4	91 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	FXYD6	Q9H0Q3	95 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	NPVF	Q9HCQ7	196 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	SCN3B	Q9NY72	215 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	COPZ2	Q9P299	210 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	LAMC1	P11047	1609 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639	ITPR3	Q14573	2671 aa		-0.61	□□□□□ -2.51
RAP1B-231	ENST00000544639		M0R2T5	61 aa		-0.62	□□□□□ -2.51
RAP1B-231	ENST00000544639	ALX1	Q15699	326 aa		-0.62	□□□□□ -2.51
RAP1B-231	ENST00000544639	KCNRG	Q8N5I3	272 aa		-0.62	□□□□□ -2.51
RAP1B-231	ENST00000544639	STARD9	Q9P2P6	4700 aa		-0.62	□□□□□ -2.51
RAP1B-231	ENST00000544639	USF3	Q68DE3	2245 aa		-0.62	□□□□□ -2.51
RAP1B-231	ENST00000544639	ZNF609	O15014	1411 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	RYR1	P21817	5038 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	PLXNB2	O15031	1838 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	CCL18	P55774	89 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	RPS25	P62851	125 aa	Known RBP	-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	DCD	P81605	110 aa	Known RBP	-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	SMIM21	Q3B7S5	101 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	ANP32B	Q92688	251 aa	Known RBP	-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	SDF2	Q99470	211 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	TP53AIP1	Q9HCN2	124 aa		-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	PRKDC	P78527	4128 aa	Known RBP	-0.63	□□□□□ -2.51
RAP1B-231	ENST00000544639	CASKIN1	Q8WXD9	1431 aa		-0.64	□□□□□ -2.51
RAP1B-231	ENST00000544639	CEP152	O94986	1710 aa		-0.64	□□□□□ -2.51

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