RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	APOC3	P02656	99 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	SFTA3	P0C7M3	94 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	IGHV3-30-3	P0DP02	117 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	IGHV3-30-5	P0DP03	117 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	ZNF138	P52744	262 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	HERVK_113	P61574	105 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	ERCC8	Q13216	396 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	RAB31	Q13636	194 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	TMEM183B	Q1AE95	376 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	FAM74A1	Q5RGS3	127 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	C10orf91	Q5T1B1	145 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	LELP1	Q5T871	98 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585		Q6ZRU5	148 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	TMEM183A	Q8IXX5	376 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	NKX6-2	Q9C056	277 aa	Predicted RBP	3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	CYTL1	Q9NRR1	136 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	ZNF492	Q9P255	531 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	TIMM9	Q9Y5J7	89 aa		3.89	□□□□□ -1.79
CPSF7-222	ENST00000544585	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	TRBV19	A0A075B6N1	114 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585		A0A1B0GW15	77 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585		H3BP45	60 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	GCG	P01275	180 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	SEC11B	P0C7V7	166 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	NMU	P48645	174 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	DSCR10	P59022	87 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	TAS2R30	P59541	319 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	RPL37A	P61513	92 aa	Known RBP	3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	SLC38A11	Q08AI6	406 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	IL15RA	Q13261	267 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	PDE6H	Q13956	83 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	TMEM14EP	Q6UXP3	125 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	ZFAND2A	Q8N6M9	145 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	RMI2	Q96E14	147 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	PFDN5	Q99471	154 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	PRADC1	Q9BSG0	188 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	SEC11C	Q9BY50	192 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	GTSF1L	Q9H1H1	148 aa		3.88	□□□□□ -1.79
CPSF7-222	ENST00000544585	TRAV8-1	A0A0A6YYK1	113 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	TRBV6-4	A0A1B0GX49	114 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	GGTLC3	B5MD39	225 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585		M0R2P5	195 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585		M0R3E3	92 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	METTL15P1	P0C7V9	234 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	SULT1A2	P50226	295 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	S100A10	P60903	97 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	WFDC2	Q14508	124 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	IAH1	Q2TAA2	248 aa	Predicted RBP	3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	ATP6V0E2	Q8NHE4	81 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	DAZ3	Q9NR90	486 aa	Known RBP	3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	SLC39A9	Q9NUM3	307 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	OR5AC2	Q9NZP5	309 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	GSKIP	Q9P0R6	139 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	TMEM14C	Q9P0S9	112 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	PSG8	Q9UQ74	426 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	DNAH8	Q96JB1	4490 aa		3.87	□□□□□ -1.79
CPSF7-222	ENST00000544585	LECT2	O14960	151 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	MT1HL1	P0DM35	61 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	PVALB	P20472	110 aa	Predicted RBP	3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	RPL12	P30050	165 aa	Known RBP	3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	RAB5C	P51148	216 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	RAB4B	P61018	213 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	PRR3	P79522	188 aa	Known RBP	3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	PEA15	Q15121	130 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	RHOH	Q15669	191 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	SAPCD1	Q5SSQ6	148 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	SLC25A29	Q8N8R3	303 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	DPH3P1	Q9H4G8	78 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	UQCC1	Q9NVA1	299 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	LENEP	Q9Y5L5	61 aa		3.86	□□□□□ -1.79
CPSF7-222	ENST00000544585	RBAKDN	A6NC62	111 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	SSSCA1	O60232	199 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	OR10J4	P0C629	311 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	ASIP	P42127	132 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	CXCL5	P42830	114 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	CSN1S1	P47710	185 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	RPL18A	Q02543	176 aa	Known RBP	3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	TAL2	Q16559	108 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	PRR9	Q5T870	116 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	MIC13	Q5XKP0	118 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585		Q6AWC8	147 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	RPL7L1	Q6DKI1	246 aa	Known RBP	3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585		Q6ZQT7	251 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	EXOC3-AS1	Q8N2X6	119 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	RNF185	Q96GF1	192 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	MGST2	Q99735	147 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	SMDT1	Q9H4I9	107 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	BIN3	Q9NQY0	253 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	SMCO4	Q9NRQ5	59 aa		3.85	□□□□□ -1.79
CPSF7-222	ENST00000544585	FAT3	Q8TDW7	4589 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585		A0A087WWC5	75 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	IGKV3D-20	A0A0C4DH25	116 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	GNRH2	O43555	120 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	NBEAP1	P0C6P0	100 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	ADCYAP1	P18509	176 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	S100P	P25815	95 aa		3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585	RPL35	P42766	123 aa	Known RBP	3.84	□□□□□ -1.79
CPSF7-222	ENST00000544585		Q0VG73	95 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms