RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TRGV1A0A0A0MS02 117 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 HIVEP1P15822 2718 aa12.33□□□□□ -0.44
PTPRO-209ENST00000543886 A0A1W2PPM0 123 aa12.33□□□□□ -0.44
PTPRO-209ENST00000543886 GIG44P09565 113 aaPredicted RBP12.33□□□□□ -0.44
PTPRO-209ENST00000543886 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
PTPRO-209ENST00000543886 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
PTPRO-209ENST00000543886 IGLV4-69A0A075B6H9 119 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 FABP2P12104 132 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 RAB37Q96AX2 223 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 SPCS1Q9Y6A9 102 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 TRBV25-1A0A075B6N4 114 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 CHAC1Q9BUX1 264 aa12.31□□□□□ -0.44
PTPRO-209ENST00000543886 C11orf86A6NJI1 115 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 EMP1P54849 157 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 E9PLD3 99 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 G3V4G9 280 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 CRLF1O75462 422 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 Q9UF83 564 aa12.3□□□□□ -0.44
PTPRO-209ENST00000543886 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
PTPRO-209ENST00000543886 HERVK_113P61574 105 aa12.29□□□□□ -0.44
PTPRO-209ENST00000543886 Q6ZTI0 123 aa12.29□□□□□ -0.44
PTPRO-209ENST00000543886 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
PTPRO-209ENST00000543886 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
PTPRO-209ENST00000543886 NIPBLQ6KC79 2804 aaeCLIP12.29□□□□□ -0.44
PTPRO-209ENST00000543886 PRADC1Q9BSG0 188 aa12.28□□□□□ -0.44
PTPRO-209ENST00000543886 GCSHP23434 173 aa12.28□□□□□ -0.44
PTPRO-209ENST00000543886 SAMD5Q5TGI4 173 aa12.28□□□□□ -0.44
PTPRO-209ENST00000543886 NOP10Q9NPE3 64 aaKnown RBP12.28□□□□□ -0.44
PTPRO-209ENST00000543886 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
PTPRO-209ENST00000543886 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
PTPRO-209ENST00000543886 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.45
PTPRO-209ENST00000543886 IGLV4-3A0A075B6K6 122 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 INSL3P51460 131 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 RRN3P1Q2M238 152 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 CSNK1G2-AS1Q8NCQ2 148 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 ZNF479Q96JC4 524 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 VCX2Q9H322 139 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
PTPRO-209ENST00000543886 TMEM170BQ5T4T1 132 aa12.26□□□□□ -0.45
PTPRO-209ENST00000543886 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
PTPRO-209ENST00000543886 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
PTPRO-209ENST00000543886 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
PTPRO-209ENST00000543886 FXYD2P54710 66 aa12.25□□□□□ -0.45
PTPRO-209ENST00000543886 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
PTPRO-209ENST00000543886 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
PTPRO-209ENST00000543886 K7EQD1 137 aa12.24□□□□□ -0.45
PTPRO-209ENST00000543886 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
PTPRO-209ENST00000543886 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.23□□□□□ -0.45
PTPRO-209ENST00000543886 TM2D2Q9BX73 214 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 ZNF815PA8K554 130 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 CEND1Q8N111 149 aa12.23□□□□□ -0.45
PTPRO-209ENST00000543886 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
PTPRO-209ENST00000543886 TAL2Q16559 108 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
PTPRO-209ENST00000543886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
PTPRO-209ENST00000543886 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
PTPRO-209ENST00000543886 GAGE7O76087 117 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 CRYBA4P53673 196 aa12.22□□□□□ -0.45
PTPRO-209ENST00000543886 CEMP1Q6PRD7 247 aaPredicted RBP12.22□□□□□ -0.45
PTPRO-209ENST00000543886 HIST1H4GQ99525 98 aa12.21□□□□□ -0.45
PTPRO-209ENST00000543886 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.45
PTPRO-209ENST00000543886 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
PTPRO-209ENST00000543886 AMELXQ99217 191 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 CITED1Q99966 193 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 SPATA3Q8NHX4 192 aa12.2□□□□□ -0.46
PTPRO-209ENST00000543886 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
PTPRO-209ENST00000543886 A0A0J9YXV3 536 aa12.19□□□□□ -0.46
PTPRO-209ENST00000543886 CIDEAO60543 219 aa12.18□□□□□ -0.46
PTPRO-209ENST00000543886 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
PTPRO-209ENST00000543886 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
PTPRO-209ENST00000543886 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
PTPRO-209ENST00000543886 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
PTPRO-209ENST00000543886 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 K7ERJ3 54 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
PTPRO-209ENST00000543886 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
PTPRO-209ENST00000543886 LGALS3P17931 250 aaKnown RBP12.17□□□□□ -0.46
PTPRO-209ENST00000543886 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
PTPRO-209ENST00000543886 GAGE4Q13068 117 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms