RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 XKRY2A2RUG3 117 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 GAGE12HA6NDE8 117 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 TRGC1P0CF51 173 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 AMTP48728 403 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 CENPWQ5EE01 88 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 GTSF1Q8WW33 167 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 C11orf52Q96A22 123 aa14.25□□□□□ -0.13
CDKN3-207ENST00000543789 TNXBP22105 4242 aa14.24□□□□□ -0.13
CDKN3-207ENST00000543789 C19orf71A6NCJ1 209 aa14.24□□□□□ -0.13
CDKN3-207ENST00000543789 NDUFS6O75380 124 aaKnown RBP14.24□□□□□ -0.13
CDKN3-207ENST00000543789 MAJINQ3KP22 176 aa14.24□□□□□ -0.13
CDKN3-207ENST00000543789 MANBALQ9NQG1 85 aa14.24□□□□□ -0.13
CDKN3-207ENST00000543789 NTF3P20783 257 aa14.23□□□□□ -0.13
CDKN3-207ENST00000543789 LYZL1Q6UWQ5 148 aa14.23□□□□□ -0.13
CDKN3-207ENST00000543789 LINC01600Q96MT4 127 aa14.23□□□□□ -0.13
CDKN3-207ENST00000543789 GNG13Q9P2W3 67 aa14.23□□□□□ -0.13
CDKN3-207ENST00000543789 IGKV3OR2-268A0A0C4DH90 116 aa14.22□□□□□ -0.13
CDKN3-207ENST00000543789 IFNA1P01562 189 aa14.22□□□□□ -0.13
CDKN3-207ENST00000543789 CCL20P78556 96 aa14.22□□□□□ -0.13
CDKN3-207ENST00000543789 HIGD2BQ4VC39 106 aa14.22□□□□□ -0.13
CDKN3-207ENST00000543789 PRSS3P2Q8NHM4 247 aa14.22□□□□□ -0.13
CDKN3-207ENST00000543789 IGKV2-24A0A0C4DH68 120 aa14.21□□□□□ -0.13
CDKN3-207ENST00000543789 KANTRA0A1W2PQU2 76 aa14.21□□□□□ -0.13
CDKN3-207ENST00000543789 SMIM12Q96EX1 92 aa14.21□□□□□ -0.13
CDKN3-207ENST00000543789 RAB19A4D1S5 217 aa14.2□□□□□ -0.14
CDKN3-207ENST00000543789 HMSDA8MTL9 139 aa14.2□□□□□ -0.14
CDKN3-207ENST00000543789 GNG4P50150 75 aa14.2□□□□□ -0.14
CDKN3-207ENST00000543789 EIF5AP63241 154 aaKnown RBP14.2□□□□□ -0.14
CDKN3-207ENST00000543789 LRP2P98164 4655 aa14.19□□□□□ -0.14
CDKN3-207ENST00000543789 BCL2L11O43521 198 aa14.19□□□□□ -0.14
CDKN3-207ENST00000543789 PRR3P79522 188 aaKnown RBP14.19□□□□□ -0.14
CDKN3-207ENST00000543789 C9orf62Q8N4C0 152 aa14.19□□□□□ -0.14
CDKN3-207ENST00000543789 STPG4Q8N801 248 aa14.19□□□□□ -0.14
CDKN3-207ENST00000543789 CHCHD10Q8WYQ3 142 aaPredicted RBP14.19□□□□□ -0.14
CDKN3-207ENST00000543789 AMMECR1LQ6DCA0 310 aa14.18□□□□□ -0.14
CDKN3-207ENST00000543789 LYPD6BQ8NI32 183 aa14.18□□□□□ -0.14
CDKN3-207ENST00000543789 TRAV1-1A0A0B4J248 108 aa14.17□□□□□ -0.14
CDKN3-207ENST00000543789 TWIST1Q15672 202 aa14.17□□□□□ -0.14
CDKN3-207ENST00000543789 BIN3Q9NQY0 253 aa14.17□□□□□ -0.14
CDKN3-207ENST00000543789 GVQW2A0A096LPI5 108 aaPredicted RBP14.16□□□□□ -0.14
CDKN3-207ENST00000543789 GATD1Q8NB37 220 aa14.16□□□□□ -0.14
CDKN3-207ENST00000543789 CTRLP40313 264 aa14.14□□□□□ -0.15
CDKN3-207ENST00000543789 RNASEKQ6P5S7 137 aaKnown RBP14.14□□□□□ -0.15
CDKN3-207ENST00000543789 LINC00474Q9P2X8 69 aa14.14□□□□□ -0.15
CDKN3-207ENST00000543789 TRAV26-2A0A0B4J265 109 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 A0A0J9YXV3 536 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 TEX46H3BTG2 121 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 H7C423 109 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 PDE6DO43924 150 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 NCR2O95944 276 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 ODF1Q14990 250 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 Q6ZNX1 250 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 NUDT10Q8NFP7 164 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 NUDT11Q96G61 164 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 CNFNQ9BYD5 112 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 MED9Q9NWA0 146 aa14.13□□□□□ -0.15
CDKN3-207ENST00000543789 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.12□□□□□ -0.15
CDKN3-207ENST00000543789 A0A096LNI7 61 aa14.12□□□□□ -0.15
CDKN3-207ENST00000543789 IGKV2-29A2NJV5 120 aaPredicted RBP14.12□□□□□ -0.15
CDKN3-207ENST00000543789 MEF2BQ02080 365 aaPredicted RBP14.12□□□□□ -0.15
CDKN3-207ENST00000543789 SPINK6Q6UWN8 80 aa14.12□□□□□ -0.15
CDKN3-207ENST00000543789 TRBV20OR9-2A0A075B6H5 130 aa14.11□□□□□ -0.15
CDKN3-207ENST00000543789 FGF6P10767 208 aa14.11□□□□□ -0.15
CDKN3-207ENST00000543789 KRTAP10-8P60410 259 aa14.11□□□□□ -0.15
CDKN3-207ENST00000543789 FOXI1Q12951 378 aa14.11□□□□□ -0.15
CDKN3-207ENST00000543789 REG3GQ6UW15 175 aa14.11□□□□□ -0.15
CDKN3-207ENST00000543789 APCSP02743 223 aa14.1□□□□□ -0.15
CDKN3-207ENST00000543789 RPL39LQ96EH5 51 aaKnown RBP14.1□□□□□ -0.15
CDKN3-207ENST00000543789 RNF213Q63HN8 5207 aa14.09□□□□□ -0.15
CDKN3-207ENST00000543789 PKIGQ9Y2B9 76 aa14.09□□□□□ -0.15
CDKN3-207ENST00000543789 XCL1P47992 114 aa14.08□□□□□ -0.16
CDKN3-207ENST00000543789 SMIM15Q7Z3B0 74 aa14.08□□□□□ -0.16
CDKN3-207ENST00000543789 OR5A1Q8NGJ0 315 aa14.08□□□□□ -0.16
CDKN3-207ENST00000543789 ZNF25P17030 456 aaPredicted RBP14.07□□□□□ -0.16
CDKN3-207ENST00000543789 TEX261Q6UWH6 196 aa14.07□□□□□ -0.16
CDKN3-207ENST00000543789 RPP21Q9H633 154 aaKnown RBP14.07□□□□□ -0.16
CDKN3-207ENST00000543789 SDHAF1A6NFY7 115 aa14.06□□□□□ -0.16
CDKN3-207ENST00000543789 SRSF9Q13242 221 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDKN3-207ENST00000543789 EIF5AL1Q6IS14 154 aaKnown RBP14.06□□□□□ -0.16
CDKN3-207ENST00000543789 LINC00526Q96FQ7 95 aa14.06□□□□□ -0.16
CDKN3-207ENST00000543789 BTF3L4Q96K17 158 aa14.06□□□□□ -0.16
CDKN3-207ENST00000543789 IGHV1-58A0A0C4DH39 117 aa14.05□□□□□ -0.16
CDKN3-207ENST00000543789 FOXA3P55318 350 aaPredicted RBP14.05□□□□□ -0.16
CDKN3-207ENST00000543789 Q6ZRP5 223 aa14.05□□□□□ -0.16
CDKN3-207ENST00000543789 TMEM101Q96IK0 257 aa14.05□□□□□ -0.16
CDKN3-207ENST00000543789 CARD19Q96LW7 228 aa14.05□□□□□ -0.16
CDKN3-207ENST00000543789 RNASE7Q9H1E1 156 aaKnown RBP14.05□□□□□ -0.16
CDKN3-207ENST00000543789 LINC00959A0A1B0GUT2 108 aa14.04□□□□□ -0.16
CDKN3-207ENST00000543789 I3L3M4 83 aa14.04□□□□□ -0.16
CDKN3-207ENST00000543789 CCL25O15444 150 aa14.04□□□□□ -0.16
CDKN3-207ENST00000543789 BCL2P10415 239 aa14.04□□□□□ -0.16
CDKN3-207ENST00000543789 PMCHP20382 165 aa14.04□□□□□ -0.16
CDKN3-207ENST00000543789 FAM231BA6NCW3 169 aa14.03□□□□□ -0.16
CDKN3-207ENST00000543789 OCC1Q8TAD7 63 aa14.02□□□□□ -0.17
CDKN3-207ENST00000543789 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
CDKN3-207ENST00000543789 K7EN84 100 aa14.01□□□□□ -0.17
CDKN3-207ENST00000543789 SYCNQ0VAF6 134 aa14.01□□□□□ -0.17
CDKN3-207ENST00000543789 SS18Q15532 418 aa14.01□□□□□ -0.17
CDKN3-207ENST00000543789 TRBV6-5A0A0K0K1A5 114 aa13.99□□□□□ -0.17
CDKN3-207ENST00000543789 ESDP10768 282 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms