RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 RYR2Q92736 4967 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 K7EP13 123 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 NPYP01303 97 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 CRPP02741 224 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 MT-ND6P03923 174 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 ANGP03950 147 aaKnown RBP4.3□□□□□ -1.72
LTBR-212ENST00000543542 DNAH10OSP0CZ25 163 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 RAB5AP20339 215 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 IQCJQ1A5X6 159 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 LINC01556Q5JQF7 62 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
LTBR-212ENST00000543542 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 NIT1Q86X76 327 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 CBLN2Q8IUK8 224 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 C6orf223Q8N319 242 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 NRACQ8N912 160 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 C20orf78Q9BR46 151 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 GNB1LQ9BYB4 327 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 MRPL18Q9H0U6 180 aaKnown RBP4.3□□□□□ -1.72
LTBR-212ENST00000543542 Q9HAA7 133 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 TRAPPC1Q9Y5R8 145 aa4.3□□□□□ -1.72
LTBR-212ENST00000543542 TRBV24-1A0A075B6N3 115 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
LTBR-212ENST00000543542 TRBV27A0A0K0K1C4 114 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
LTBR-212ENST00000543542 PHOX2AO14813 284 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 TCAPO15273 167 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 PSCAO43653 123 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 TSHBP01222 138 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 POLR2KP53803 58 aaKnown RBP4.29□□□□□ -1.72
LTBR-212ENST00000543542 SMAGPQ0VAQ4 97 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 MPV17L2Q567V2 206 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 Q8N3U1 123 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 TMEM101Q96IK0 257 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 SMIM2Q9BVW6 85 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 KLK12Q9UKR0 248 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 LAMTOR2Q9Y2Q5 125 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
LTBR-212ENST00000543542 RYR3Q15413 4870 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 RBX1P62877 108 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 Q6ZR54 194 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 Q8N976 141 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 UBE2WQ96B02 151 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 RMI2Q96E14 147 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
LTBR-212ENST00000543542 IGKV2D-24A0A075B6R9 120 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 TRAV8-3A0A0A6YYJ7 113 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 IGKV3OR2-268A0A0C4DH90 116 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 IBA57-AS1B1ANH7 110 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 H7C423 109 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 FGF6P10767 208 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 RPL32P62910 135 aaKnown RBP4.27□□□□□ -1.73
LTBR-212ENST00000543542 Q0VG73 95 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 LINC00269Q8N2A0 174 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 Q8N8P6 123 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
LTBR-212ENST00000543542 NXT2Q9NPJ8 142 aaKnown RBP4.27□□□□□ -1.73
LTBR-212ENST00000543542 KMT2AQ03164 3969 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 EREGO14944 169 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 SCO1O75880 301 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 ZNF25P17030 456 aaPredicted RBP4.26□□□□□ -1.73
LTBR-212ENST00000543542 BTF3P20290 206 aaKnown RBP4.26□□□□□ -1.73
LTBR-212ENST00000543542 S100A1P23297 94 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 IFI27P40305 119 aaPredicted RBP4.26□□□□□ -1.73
LTBR-212ENST00000543542 LAGE3Q14657 143 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 ORMDL2Q53FV1 153 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 LINC00336Q6ZUF6 198 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 OR5A1Q8NGJ0 315 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 ALKBH7Q9BT30 221 aaPredicted RBP4.26□□□□□ -1.73
LTBR-212ENST00000543542 C1orf43Q9BWL3 253 aa4.26□□□□□ -1.73
LTBR-212ENST00000543542 IGLV4-60A0A075B6I1 120 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 PRSS47A8MTI9 375 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 RTL8CO15255 209 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 ATP6V1G1O75348 118 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 ESDP10768 282 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 G0S2P27469 103 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 REG3AQ06141 175 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 MIAQ16674 131 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 C20orf203Q8NBC4 194 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 COX11Q9Y6N1 276 aa4.25□□□□□ -1.73
LTBR-212ENST00000543542 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 K7EMI3 77 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 TRGC2P03986 189 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 RAB5BP61020 215 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
LTBR-212ENST00000543542 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 ZNF664Q8N3J9 261 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
LTBR-212ENST00000543542 CYSLTR1Q9Y271 337 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms