RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 RAB5BP61020 215 aa12.4□□□□□ -0.42
TMED3-204ENST00000543455 LAGE3Q14657 143 aa12.4□□□□□ -0.43
TMED3-204ENST00000543455 DAZ4Q86SG3 579 aaKnown RBP12.4□□□□□ -0.43
TMED3-204ENST00000543455 Q8N1X5 172 aa12.4□□□□□ -0.43
TMED3-204ENST00000543455 AP1S3Q96PC3 154 aa12.4□□□□□ -0.43
TMED3-204ENST00000543455 DAZ3Q9NR90 486 aaKnown RBP12.4□□□□□ -0.43
TMED3-204ENST00000543455 TRAPPC1Q9Y5R8 145 aa12.4□□□□□ -0.43
TMED3-204ENST00000543455 FAT1Q14517 4588 aa12.39□□□□□ -0.43
TMED3-204ENST00000543455 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
TMED3-204ENST00000543455 UBE2D3P61077 147 aa12.39□□□□□ -0.43
TMED3-204ENST00000543455 UBE2D2P62837 147 aa12.39□□□□□ -0.43
TMED3-204ENST00000543455 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
TMED3-204ENST00000543455 WFDC2Q14508 124 aa12.38□□□□□ -0.43
TMED3-204ENST00000543455 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
TMED3-204ENST00000543455 MRPL18Q9H0U6 180 aaKnown RBP12.38□□□□□ -0.43
TMED3-204ENST00000543455 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
TMED3-204ENST00000543455 PSCAO43653 123 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 TRGC2P03986 189 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 XGP55808 180 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 FABP9Q0Z7S8 132 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 NIT1Q86X76 327 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 FRZBQ92765 325 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
TMED3-204ENST00000543455 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
TMED3-204ENST00000543455 PHOX2AO14813 284 aa12.36□□□□□ -0.43
TMED3-204ENST00000543455 APCSP02743 223 aa12.36□□□□□ -0.43
TMED3-204ENST00000543455 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
TMED3-204ENST00000543455 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
TMED3-204ENST00000543455 ZNF56Q15929 161 aa12.35□□□□□ -0.43
TMED3-204ENST00000543455 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
TMED3-204ENST00000543455 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
TMED3-204ENST00000543455 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
TMED3-204ENST00000543455 RAB4AP20338 218 aa12.34□□□□□ -0.43
TMED3-204ENST00000543455 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
TMED3-204ENST00000543455 Q8N814 137 aa12.34□□□□□ -0.43
TMED3-204ENST00000543455 VPS13BQ7Z7G8 4022 aa12.33□□□□□ -0.44
TMED3-204ENST00000543455 GCSHP23434 173 aa12.33□□□□□ -0.44
TMED3-204ENST00000543455 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
TMED3-204ENST00000543455 LOC105371267A0A1B0GV96 52 aa12.32□□□□□ -0.44
TMED3-204ENST00000543455 KIAA1644Q3SXP7 199 aa12.32□□□□□ -0.44
TMED3-204ENST00000543455 TRAV8-3A0A0A6YYJ7 113 aa12.31□□□□□ -0.44
TMED3-204ENST00000543455 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
TMED3-204ENST00000543455 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
TMED3-204ENST00000543455 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
TMED3-204ENST00000543455 PPBPP02775 128 aa12.3□□□□□ -0.44
TMED3-204ENST00000543455 MGPP08493 103 aa12.3□□□□□ -0.44
TMED3-204ENST00000543455 MRAP2Q96G30 205 aa12.3□□□□□ -0.44
TMED3-204ENST00000543455 KLK12Q9UKR0 248 aa12.3□□□□□ -0.44
TMED3-204ENST00000543455 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
TMED3-204ENST00000543455 NTM-AS1Q6ZSK4 140 aa12.29□□□□□ -0.44
TMED3-204ENST00000543455 D6R8Y8 96 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 F5H697 171 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 LECT2O14960 151 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 S100A6P06703 90 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 CKS2P33552 79 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 ALKBH7Q9BT30 221 aaPredicted RBP12.28□□□□□ -0.44
TMED3-204ENST00000543455 CHCHD7Q9BUK0 85 aa12.28□□□□□ -0.44
TMED3-204ENST00000543455 HAMPP81172 84 aa12.27□□□□□ -0.44
TMED3-204ENST00000543455 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 M0QY20 66 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BKO60814 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BJP06899 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BOP23527 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BBP33778 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BDP58876 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BCP62807 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST2H2BEQ16778 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 MPV17L2Q567V2 206 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.27□□□□□ -0.45
TMED3-204ENST00000543455 SUMO4Q6EEV6 95 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BHQ93079 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 PRELID3AQ96N28 172 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BNQ99877 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 HIST1H2BMQ99879 126 aa12.27□□□□□ -0.45
TMED3-204ENST00000543455 A0A087WX48 190 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 GAS8-AS1O95177 125 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 NCR2O95944 276 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 BAALCQ8WXS3 180 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 UBE2WQ96B02 151 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
TMED3-204ENST00000543455 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
TMED3-204ENST00000543455 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
TMED3-204ENST00000543455 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
TMED3-204ENST00000543455 NRACQ8N912 160 aa12.24□□□□□ -0.45
TMED3-204ENST00000543455 TMEM70Q9BUB7 260 aa12.23□□□□□ -0.45
TMED3-204ENST00000543455 C5orf52A6NGY3 159 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 TMEM262E9PQX1 116 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 H7C1H1 209 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 PPP1R17O96001 155 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 NPYP01303 97 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 Q8N976 141 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 C18orf32Q8TCD1 76 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
TMED3-204ENST00000543455 EPM2AB3EWF7 344 aa12.21□□□□□ -0.45
TMED3-204ENST00000543455 Q0VG73 95 aa12.21□□□□□ -0.45
TMED3-204ENST00000543455 RMI2Q96E14 147 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms