RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 TIMM17BO60830 172 aa14.89□□□□□ -0.03
HDAC4-215ENST00000543185 Q6ZSR3 168 aa14.89□□□□□ -0.03
HDAC4-215ENST00000543185 PROK2Q9HC23 129 aa14.88□□□□□ -0.03
HDAC4-215ENST00000543185 PIK3CD-AS1Q5SR53 167 aa14.87□□□□□ -0.03
HDAC4-215ENST00000543185 A0A0J9YY99 117 aa14.87□□□□□ -0.03
HDAC4-215ENST00000543185 Q96MF0 132 aa14.87□□□□□ -0.03
HDAC4-215ENST00000543185 IBA57-AS1B1ANH7 110 aa14.87□□□□□ -0.03
HDAC4-215ENST00000543185 CENPVL3A0A0U1RRI6 287 aa14.87□□□□□ -0.03
HDAC4-215ENST00000543185 DIAPH2-AS1Q14236 149 aa14.86□□□□□ -0.03
HDAC4-215ENST00000543185 NFE4Q86UQ8 179 aa14.86□□□□□ -0.03
HDAC4-215ENST00000543185 C4orf3Q8WVX3 66 aa14.86□□□□□ -0.03
HDAC4-215ENST00000543185 NEXN-AS1Q8NBZ9 246 aa14.86□□□□□ -0.03
HDAC4-215ENST00000543185 ACANP16112 2415 aa14.86□□□□□ -0.03
HDAC4-215ENST00000543185 C5orf56Q8N8D9 126 aa14.85□□□□□ -0.03
HDAC4-215ENST00000543185 TP73-AS1Q9UF72 201 aa14.85□□□□□ -0.03
HDAC4-215ENST00000543185 PKD1L2Q7Z442 2459 aa14.85□□□□□ -0.03
HDAC4-215ENST00000543185 C11orf53Q8IXP5 236 aa14.85□□□□□ -0.03
HDAC4-215ENST00000543185 ENHOQ6UWT2 76 aa14.85□□□□□ -0.03
HDAC4-215ENST00000543185 ANKRD17O75179 2603 aaKnown RBP14.84□□□□□ -0.03
HDAC4-215ENST00000543185 A0A0U1RQV1 116 aa14.84□□□□□ -0.03
HDAC4-215ENST00000543185 ZNF503-AS2A6NEH8 195 aa14.84□□□□□ -0.03
HDAC4-215ENST00000543185 MSRB1Q9NZV6 116 aa14.84□□□□□ -0.03
HDAC4-215ENST00000543185 PIEZO1Q92508 2521 aa14.84□□□□□ -0.03
HDAC4-215ENST00000543185 COX7CP15954 63 aa14.83□□□□□ -0.03
HDAC4-215ENST00000543185 Q6Q795 121 aa14.83□□□□□ -0.04
HDAC4-215ENST00000543185 FAM222AQ5U5X8 452 aa14.82□□□□□ -0.04
HDAC4-215ENST00000543185 C1orf195Q5TG92 126 aa14.82□□□□□ -0.04
HDAC4-215ENST00000543185 ARTNQ5T4W7 220 aa14.81□□□□□ -0.04
HDAC4-215ENST00000543185 PATE2Q6UY27 113 aa14.81□□□□□ -0.04
HDAC4-215ENST00000543185 ZFAND2AQ8N6M9 145 aa14.81□□□□□ -0.04
HDAC4-215ENST00000543185 RBX1P62877 108 aa14.81□□□□□ -0.04
HDAC4-215ENST00000543185 U3KQK5 164 aa14.8□□□□□ -0.04
HDAC4-215ENST00000543185 MUC7Q8TAX7 377 aa14.8□□□□□ -0.04
HDAC4-215ENST00000543185 INSL3P51460 131 aa14.79□□□□□ -0.04
HDAC4-215ENST00000543185 TRIAP1O43715 76 aa14.79□□□□□ -0.04
HDAC4-215ENST00000543185 IGHV4OR15-8A0A075B7B6 117 aa14.79□□□□□ -0.04
HDAC4-215ENST00000543185 A0A087WW49 117 aa14.79□□□□□ -0.04
HDAC4-215ENST00000543185 COX17Q14061 63 aa14.78□□□□□ -0.04
HDAC4-215ENST00000543185 IGLV2-23P01705 113 aa14.78□□□□□ -0.04
HDAC4-215ENST00000543185 FAM215AQ9Y5M1 114 aa14.78□□□□□ -0.04
HDAC4-215ENST00000543185 AJUBAQ96IF1 538 aa14.78□□□□□ -0.04
HDAC4-215ENST00000543185 SLURP1P55000 103 aa14.77□□□□□ -0.04
HDAC4-215ENST00000543185 APRG1Q8IVJ8 170 aa14.77□□□□□ -0.04
HDAC4-215ENST00000543185 TMEM223A0PJW6 202 aa14.77□□□□□ -0.05
HDAC4-215ENST00000543185 SERP1Q9Y6X1 66 aa14.76□□□□□ -0.05
HDAC4-215ENST00000543185 PRO0255Q9UI72 69 aa14.76□□□□□ -0.05
HDAC4-215ENST00000543185 IGLV2-14P01704 120 aa14.76□□□□□ -0.05
HDAC4-215ENST00000543185 LINC00308Q8TCZ7 52 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 PRSS33Q8NF86 280 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 A0A0J9YX75 114 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 C11orf1Q9H5F2 150 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 DEFB136Q30KP8 78 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 SMIM26A0A096LP01 95 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 IGHV4-59P01825 116 aa14.75□□□□□ -0.05
HDAC4-215ENST00000543185 SP5Q6BEB4 398 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-215ENST00000543185 CTSZQ9UBR2 303 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 TTTY13Q9BZ97 58 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 IGHV3-30P01768 117 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 IGHV3-33P01772 117 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 IGHV3-30-5P0DP03 117 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 DHRS4-AS1Q9P1J3 65 aa14.74□□□□□ -0.05
HDAC4-215ENST00000543185 PLA2G2EQ9NZK7 142 aa14.73□□□□□ -0.05
HDAC4-215ENST00000543185 SMIM9A6NGZ8 99 aa14.73□□□□□ -0.05
HDAC4-215ENST00000543185 USP9XQ93008 2570 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-215ENST00000543185 CFAP126Q5VTH2 177 aa14.72□□□□□ -0.05
HDAC4-215ENST00000543185 COL4A6Q14031 1691 aa14.72□□□□□ -0.05
HDAC4-215ENST00000543185 P0C879 139 aa14.71□□□□□ -0.05
HDAC4-215ENST00000543185 LST1O00453 97 aa14.71□□□□□ -0.05
HDAC4-215ENST00000543185 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
HDAC4-215ENST00000543185 KLK12Q9UKR0 248 aa14.71□□□□□ -0.05
HDAC4-215ENST00000543185 F8W735 103 aaPredicted RBP14.71□□□□□ -0.06
HDAC4-215ENST00000543185 Q8N9W7 124 aa14.7□□□□□ -0.06
HDAC4-215ENST00000543185 KLK5Q9Y337 293 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-215ENST00000543185 CCKP06307 115 aa14.7□□□□□ -0.06
HDAC4-215ENST00000543185 IL17DQ8TAD2 202 aa14.7□□□□□ -0.06
HDAC4-215ENST00000543185 LINC00574Q9H8X3 128 aa14.7□□□□□ -0.06
HDAC4-215ENST00000543185 LYPD6Q86Y78 171 aa14.7□□□□□ -0.06
HDAC4-215ENST00000543185 PYGO1Q9Y3Y4 419 aa14.69□□□□□ -0.06
HDAC4-215ENST00000543185 ANKRD11Q6UB99 2663 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-215ENST00000543185 LY6G6EA0A0G2JKS1 128 aa14.68□□□□□ -0.06
HDAC4-215ENST00000543185 REG3AQ06141 175 aa14.68□□□□□ -0.06
HDAC4-215ENST00000543185 U3KQA8 63 aa14.68□□□□□ -0.06
HDAC4-215ENST00000543185 MLST8Q9BVC4 326 aa14.68□□□□□ -0.06
HDAC4-215ENST00000543185 IGF2-ASQ6U949 168 aa14.67□□□□□ -0.06
HDAC4-215ENST00000543185 RITA1Q96K30 269 aa14.67□□□□□ -0.06
HDAC4-215ENST00000543185 WFDC10BQ8IUB3 73 aa14.67□□□□□ -0.06
HDAC4-215ENST00000543185 PRAC2D3DTV9 90 aa14.67□□□□□ -0.06
HDAC4-215ENST00000543185 Q8N9L7 120 aa14.67□□□□□ -0.06
HDAC4-215ENST00000543185 ZNF706Q9Y5V0 76 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-215ENST00000543185 Q6JHZ5 121 aa14.66□□□□□ -0.06
HDAC4-215ENST00000543185 ODF3L1Q8IXM7 274 aa14.66□□□□□ -0.06
HDAC4-215ENST00000543185 LOXL1Q08397 574 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-215ENST00000543185 IGLV1-47P01700 117 aa14.65□□□□□ -0.06
HDAC4-215ENST00000543185 WT1P19544 449 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-215ENST00000543185 RNF138Q8WVD3 245 aa14.65□□□□□ -0.06
HDAC4-215ENST00000543185 MIFP14174 115 aa14.64□□□□□ -0.07
HDAC4-215ENST00000543185 TRAV7A0A075B6U4 112 aa14.64□□□□□ -0.07
HDAC4-215ENST00000543185 MAPK1IP1LQ8NDC0 245 aa14.64□□□□□ -0.07
HDAC4-215ENST00000543185 TRBV27A0A0K0K1C4 114 aa14.63□□□□□ -0.07
HDAC4-215ENST00000543185 ZNF524Q96C55 264 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms