RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 RNF185Q96GF1 192 aa13.29□□□□□ -0.28
CACNA2D4-215ENST00000542340 PRR34Q9NV39 138 aa13.29□□□□□ -0.28
CACNA2D4-215ENST00000542340 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 NCR2O95944 276 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 MIAQ16674 131 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 BAALCQ8WXS3 180 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 MRAP2Q96G30 205 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 C1orf43Q9BWL3 253 aa13.28□□□□□ -0.28
CACNA2D4-215ENST00000542340 GCSHP23434 173 aa13.27□□□□□ -0.29
CACNA2D4-215ENST00000542340 AMN1Q8IY45 258 aa13.27□□□□□ -0.29
CACNA2D4-215ENST00000542340 LINC00269Q8N2A0 174 aa13.27□□□□□ -0.29
CACNA2D4-215ENST00000542340 A0A1B0GW15 77 aa13.26□□□□□ -0.29
CACNA2D4-215ENST00000542340 UBE2L6O14933 153 aa13.26□□□□□ -0.29
CACNA2D4-215ENST00000542340 LECT2O14960 151 aa13.26□□□□□ -0.29
CACNA2D4-215ENST00000542340 IFITM2Q01629 132 aa13.26□□□□□ -0.29
CACNA2D4-215ENST00000542340 I3L3M4 83 aa13.25□□□□□ -0.29
CACNA2D4-215ENST00000542340 GAS8-AS1O95177 125 aa13.25□□□□□ -0.29
CACNA2D4-215ENST00000542340 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
CACNA2D4-215ENST00000542340 C20orf203Q8NBC4 194 aa13.25□□□□□ -0.29
CACNA2D4-215ENST00000542340 ST20Q9HBF5 79 aa13.25□□□□□ -0.29
CACNA2D4-215ENST00000542340 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
CACNA2D4-215ENST00000542340 PMCHP20382 165 aa13.24□□□□□ -0.29
CACNA2D4-215ENST00000542340 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
CACNA2D4-215ENST00000542340 HSPG2P98160 4391 aa13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 IGLV4-60A0A075B6I1 120 aa13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 PPP1R17O96001 155 aa13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 RPS10P46783 165 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 CAMPP49913 170 aa13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 TMEM70Q9BUB7 260 aa13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 APOBP04114 4563 aaKnown RBP13.23□□□□□ -0.29
CACNA2D4-215ENST00000542340 H7C423 109 aa13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 APCSP02743 223 aa13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 POLR2KP53803 58 aaKnown RBP13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 REG3AQ06141 175 aa13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 FAM104BQ5XKR9 115 aa13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
CACNA2D4-215ENST00000542340 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
CACNA2D4-215ENST00000542340 S100A8P05109 93 aa13.21□□□□□ -0.29
CACNA2D4-215ENST00000542340 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
CACNA2D4-215ENST00000542340 HBBP68871 147 aa13.2□□□□□ -0.3
CACNA2D4-215ENST00000542340 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
CACNA2D4-215ENST00000542340 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 LINC00862A6NCI5 91 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 SMKR1H3BMG3 65 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 TSHBP01222 138 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 MT-ND4LP03901 98 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 MRPL51Q4U2R6 128 aaKnown RBP13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 C14orf177Q52M58 125 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 UQCC3Q6UW78 93 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 NRACQ8N912 160 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
CACNA2D4-215ENST00000542340 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 F8W036 122 aa13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 VCYO14598 125 aa13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 ESDP10768 282 aa13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 XGP55808 180 aa13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 AMMECR1LQ6DCA0 310 aa13.18□□□□□ -0.3
CACNA2D4-215ENST00000542340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 HLA-DQA1P01909 254 aa13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 SUMO2P61956 95 aaKnown RBP13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
CACNA2D4-215ENST00000542340 FGF6P10767 208 aa13.16□□□□□ -0.3
CACNA2D4-215ENST00000542340 CKS2P33552 79 aa13.16□□□□□ -0.3
CACNA2D4-215ENST00000542340 Q8N1X5 172 aa13.16□□□□□ -0.3
CACNA2D4-215ENST00000542340 KRTAP17-1Q9BYP8 105 aa13.16□□□□□ -0.3
CACNA2D4-215ENST00000542340 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
CACNA2D4-215ENST00000542340 USP17L23D6RBM5 183 aa13.15□□□□□ -0.3
CACNA2D4-215ENST00000542340 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
CACNA2D4-215ENST00000542340 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
CACNA2D4-215ENST00000542340 PCLOQ9Y6V0 5065 aa13.14□□□□□ -0.31
CACNA2D4-215ENST00000542340 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
CACNA2D4-215ENST00000542340 TMEM218A2RU14 115 aa13.14□□□□□ -0.31
CACNA2D4-215ENST00000542340 C20orf78Q9BR46 151 aa13.14□□□□□ -0.31
CACNA2D4-215ENST00000542340 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
CACNA2D4-215ENST00000542340 KIR2DL4Q99706 377 aa13.13□□□□□ -0.31
CACNA2D4-215ENST00000542340 PPBPP02775 128 aa13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 FCER1GP30273 86 aa13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 TMEM101Q96IK0 257 aa13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 KRTAP4-5Q9BYR2 181 aa13.12□□□□□ -0.31
CACNA2D4-215ENST00000542340 C7orf77A4D0Y5 90 aa13.11□□□□□ -0.31
CACNA2D4-215ENST00000542340 D6R8Y8 96 aa13.11□□□□□ -0.31
CACNA2D4-215ENST00000542340 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
CACNA2D4-215ENST00000542340 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
CACNA2D4-215ENST00000542340 CLRN3Q8NCR9 226 aa13.1□□□□□ -0.31
CACNA2D4-215ENST00000542340 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
CACNA2D4-215ENST00000542340 PHOX2AO14813 284 aa13.09□□□□□ -0.31
CACNA2D4-215ENST00000542340 PRSS1P07477 247 aa13.09□□□□□ -0.31
CACNA2D4-215ENST00000542340 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
CACNA2D4-215ENST00000542340 FAM30AQ9NZY2 134 aa13.09□□□□□ -0.31
CACNA2D4-215ENST00000542340 TCAPO15273 167 aa13.08□□□□□ -0.32
CACNA2D4-215ENST00000542340 LINC01620Q4KN68 170 aa13.08□□□□□ -0.32
CACNA2D4-215ENST00000542340 DGAT2L7PQ6IED9 249 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms