RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IGHV3-16A0A0C4DH30 117 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 M0QY20 66 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
CNOT9-208ENST00000542068 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 RNF183Q96D59 192 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 CD28P10747 220 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 DEFB131AP59861 70 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 HIST2H2BCQ6DN03 193 aa11.33□□□□□ -0.6
CNOT9-208ENST00000542068 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
CNOT9-208ENST00000542068 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
CNOT9-208ENST00000542068 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
CNOT9-208ENST00000542068 DAND5Q8N907 189 aa11.32□□□□□ -0.6
CNOT9-208ENST00000542068 AMELXQ99217 191 aa11.32□□□□□ -0.6
CNOT9-208ENST00000542068 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
CNOT9-208ENST00000542068 HECTD1Q9ULT8 2610 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 TRBV20-1A0A075B6N2 111 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 IGHV1OR15-1A0A075B7D0 117 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 RHODO00212 210 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 IGHV3-33P01772 117 aa11.31□□□□□ -0.6
CNOT9-208ENST00000542068 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
CNOT9-208ENST00000542068 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
CNOT9-208ENST00000542068 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
CNOT9-208ENST00000542068 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
CNOT9-208ENST00000542068 PSMB8P28062 276 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 TEX49A0A1B0GTD5 131 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 LGALS9O00182 355 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 LEPROTO15243 131 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 NXPH4O95158 308 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
CNOT9-208ENST00000542068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-208ENST00000542068 IGKV2-29A2NJV5 120 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-208ENST00000542068 H3BUA1 57 aa11.28□□□□□ -0.6
CNOT9-208ENST00000542068 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-208ENST00000542068 Q96MF0 132 aa11.28□□□□□ -0.6
CNOT9-208ENST00000542068 HELZ2Q9BYK8 2649 aaKnown RBP11.28□□□□□ -0.6
CNOT9-208ENST00000542068 I3L3M4 83 aa11.28□□□□□ -0.6
CNOT9-208ENST00000542068 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
CNOT9-208ENST00000542068 TMEM263Q8WUH6 116 aaKnown RBP11.28□□□□□ -0.6
CNOT9-208ENST00000542068 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
CNOT9-208ENST00000542068 A0A0J9YX75 114 aa11.27□□□□□ -0.6
CNOT9-208ENST00000542068 A0A0J9YXY3 114 aa11.27□□□□□ -0.6
CNOT9-208ENST00000542068 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.61
CNOT9-208ENST00000542068 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
CNOT9-208ENST00000542068 TEX29Q8N6K0 151 aa11.27□□□□□ -0.61
CNOT9-208ENST00000542068 APCP25054 2843 aa11.27□□□□□ -0.61
CNOT9-208ENST00000542068 CLEC2BQ92478 149 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 ZFAND6Q6FIF0 208 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 TNFRSF18Q9Y5U5 241 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 TRIAP1O43715 76 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 CRLF1O75462 422 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 POM121L12Q8N7R1 296 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
CNOT9-208ENST00000542068 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
CNOT9-208ENST00000542068 LINC01620Q4KN68 170 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
CNOT9-208ENST00000542068 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
CNOT9-208ENST00000542068 LINC01587Q99440 93 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 SNCGO76070 127 aa11.24□□□□□ -0.61
CNOT9-208ENST00000542068 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 DSCR9P59020 149 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
CNOT9-208ENST00000542068 RHOHQ15669 191 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 Q6ZSN1 163 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
CNOT9-208ENST00000542068 B5MCH6 92 aa11.22□□□□□ -0.61
CNOT9-208ENST00000542068 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
CNOT9-208ENST00000542068 K7EMT4 169 aa11.22□□□□□ -0.61
CNOT9-208ENST00000542068 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
CNOT9-208ENST00000542068 K7EQG2 157 aa11.22□□□□□ -0.61
CNOT9-208ENST00000542068 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
CNOT9-208ENST00000542068 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
CNOT9-208ENST00000542068 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
CNOT9-208ENST00000542068 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
CNOT9-208ENST00000542068 IGHV3-53P01767 116 aa11.21□□□□□ -0.62
CNOT9-208ENST00000542068 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.2□□□□□ -0.62
CNOT9-208ENST00000542068 M0R2P5 195 aa11.2□□□□□ -0.62
CNOT9-208ENST00000542068 CFHR3Q02985 330 aa11.2□□□□□ -0.62
CNOT9-208ENST00000542068 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
CNOT9-208ENST00000542068 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
CNOT9-208ENST00000542068 IGHV4-31P0DP07 118 aa11.2□□□□□ -0.62
CNOT9-208ENST00000542068 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
CNOT9-208ENST00000542068 SBSPONQ8IVN8 264 aa11.19□□□□□ -0.62
CNOT9-208ENST00000542068 ZNF702PQ9H963 129 aa11.19□□□□□ -0.62
CNOT9-208ENST00000542068 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms