RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	RMI2	Q96E14	147 aa		13.13	□□□□□ -0.31
ARF3-208	ENST00000541959	MRAP2	Q96G30	205 aa		13.13	□□□□□ -0.31
ARF3-208	ENST00000541959	ST20	Q9HBF5	79 aa		13.13	□□□□□ -0.31
ARF3-208	ENST00000541959		A0A1B0GW15	77 aa		13.12	□□□□□ -0.31
ARF3-208	ENST00000541959	TMEM218	A2RU14	115 aa		13.12	□□□□□ -0.31
ARF3-208	ENST00000541959	PMCH	P20382	165 aa		13.12	□□□□□ -0.31
ARF3-208	ENST00000541959	KRTAP10-2	P60368	255 aa		13.12	□□□□□ -0.31
ARF3-208	ENST00000541959	HBB	P68871	147 aa		13.12	□□□□□ -0.31
ARF3-208	ENST00000541959	S100A8	P05109	93 aa		13.11	□□□□□ -0.31
ARF3-208	ENST00000541959	RBX1	P62877	108 aa		13.11	□□□□□ -0.31
ARF3-208	ENST00000541959	CLPSL2	Q6UWE3	100 aa		13.11	□□□□□ -0.31
ARF3-208	ENST00000541959	DNAH5	Q8TE73	4624 aa		13.11	□□□□□ -0.31
ARF3-208	ENST00000541959	APCS	P02743	223 aa		13.1	□□□□□ -0.31
ARF3-208	ENST00000541959	ADCYAP1	P18509	176 aa		13.1	□□□□□ -0.31
ARF3-208	ENST00000541959	FUS	P35637	526 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	6e-9	■□□□□ 10.6
ARF3-208	ENST00000541959	RPS10	P46783	165 aa	Known RBP	13.1	□□□□□ -0.31
ARF3-208	ENST00000541959	FAM104B	Q5XKR9	115 aa		13.1	□□□□□ -0.31
ARF3-208	ENST00000541959	TRBV6-5	A0A0K0K1A5	114 aa		13.09	□□□□□ -0.31
ARF3-208	ENST00000541959		I3L3M4	83 aa		13.09	□□□□□ -0.31
ARF3-208	ENST00000541959		Q0VG73	95 aa		13.09	□□□□□ -0.31
ARF3-208	ENST00000541959	MRPL51	Q4U2R6	128 aa	Known RBP	13.09	□□□□□ -0.31
ARF3-208	ENST00000541959	TMEM70	Q9BUB7	260 aa		13.08	□□□□□ -0.32
ARF3-208	ENST00000541959	COX11	Q9Y6N1	276 aa		13.08	□□□□□ -0.32
ARF3-208	ENST00000541959		A0A1B0GXF2	115 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	LECT2	O14960	151 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	CKS2	P33552	79 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	LINC00269	Q8N2A0	174 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	C1orf43	Q9BWL3	253 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	TMEM242	Q9NWH2	141 aa		13.07	□□□□□ -0.32
ARF3-208	ENST00000541959	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	LINC00862	A6NCI5	91 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	PPP1R17	O96001	155 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	AMMECR1L	Q6DCA0	310 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	ENHO	Q6UWT2	76 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	ATP5L2	Q7Z4Y8	100 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	SEC11C	Q9BY50	192 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	KRTAP17-1	Q9BYP8	105 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	HSPG2	P98160	4391 aa		13.06	□□□□□ -0.32
ARF3-208	ENST00000541959	LRCOL1	A6NCL2	159 aa		13.05	□□□□□ -0.32
ARF3-208	ENST00000541959	RNASEK	Q6P5S7	137 aa	Known RBP	13.05	□□□□□ -0.32
ARF3-208	ENST00000541959	BAALC	Q8WXS3	180 aa		13.05	□□□□□ -0.32
ARF3-208	ENST00000541959	PCLO	Q9Y6V0	5065 aa		13.05	□□□□□ -0.32
ARF3-208	ENST00000541959	IGLV4-60	A0A075B6I1	120 aa		13.04	□□□□□ -0.32
ARF3-208	ENST00000541959	NRAC	Q8N912	160 aa		13.04	□□□□□ -0.32
ARF3-208	ENST00000541959	PGPEP1	Q9NXJ5	209 aa		13.04	□□□□□ -0.32
ARF3-208	ENST00000541959	CDK2AP2	O75956	126 aa		13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	TSHB	P01222	138 aa		13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	FCER1G	P30273	86 aa		13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	POLR2K	P53803	58 aa	Known RBP	13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	SUMO2	P61956	95 aa	Known RBP	13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	MIA	Q16674	131 aa		13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	C20orf203	Q8NBC4	194 aa		13.03	□□□□□ -0.32
ARF3-208	ENST00000541959	APOB	P04114	4563 aa	Known RBP	13.02	□□□□□ -0.33
ARF3-208	ENST00000541959		D6R8Y8	96 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	VCY	O14598	125 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	HLA-DQA1	P01909	254 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	REG3A	Q06141	175 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	WFDC2	Q14508	124 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959		Q8N814	137 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	MAPKAPK5-AS1	Q8N8E1	139 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	BTF3L4	Q96K17	158 aa		13.02	□□□□□ -0.33
ARF3-208	ENST00000541959	IGKV3OR2-268	A0A0C4DH90	116 aa		13.01	□□□□□ -0.33
ARF3-208	ENST00000541959		A0A1B0GUV1	79 aa		13.01	□□□□□ -0.33
ARF3-208	ENST00000541959	CDPF1	Q6NVV7	123 aa		13.01	□□□□□ -0.33
ARF3-208	ENST00000541959	CTDSP1	Q9GZU7	261 aa		13.01	□□□□□ -0.33
ARF3-208	ENST00000541959	IGLV10-54	A0A075B6I4	117 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	IGLV5-52	A0A0A0MRZ9	124 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	TRBV27	A0A0K0K1C4	114 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	TNFRSF6B	O95407	300 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	KIR2DL4	Q99706	377 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	PRR34	Q9NV39	138 aa		13	□□□□□ -0.33
ARF3-208	ENST00000541959	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	12.99	□□□□□ -0.33
ARF3-208	ENST00000541959	FGF6	P10767	208 aa		12.99	□□□□□ -0.33
ARF3-208	ENST00000541959	C7orf77	A4D0Y5	90 aa		12.98	□□□□□ -0.33
ARF3-208	ENST00000541959		H7C423	109 aa		12.98	□□□□□ -0.33
ARF3-208	ENST00000541959	NPY	P01303	97 aa		12.98	□□□□□ -0.33
ARF3-208	ENST00000541959	TMEM101	Q96IK0	257 aa		12.98	□□□□□ -0.33
ARF3-208	ENST00000541959	PPBP	P02775	128 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	S100P	P25815	95 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	TMEM136	Q6ZRR5	245 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	ORMDL3	Q8N138	153 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	NTN5	Q8WTR8	489 aa	Predicted RBP	12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	PRELID3A	Q96N28	172 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	IMMP2L	Q96T52	175 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	C20orf78	Q9BR46	151 aa		12.97	□□□□□ -0.33
ARF3-208	ENST00000541959	ESD	P10768	282 aa		12.96	□□□□□ -0.33
ARF3-208	ENST00000541959	RPS10P5	Q9NQ39	176 aa		12.96	□□□□□ -0.33
ARF3-208	ENST00000541959	ABCA13	Q86UQ4	5058 aa		12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	TRBV24-1	A0A075B6N3	115 aa		12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	C10orf91	Q5T1B1	145 aa		12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	OR5A1	Q8NGJ0	315 aa		12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	SMIM2	Q9BVW6	85 aa		12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.95	□□□□□ -0.34
ARF3-208	ENST00000541959	TRAV8-4	A0A0B4J246	113 aa		12.94	□□□□□ -0.34
ARF3-208	ENST00000541959	ZNF25	P17030	456 aa	Predicted RBP	12.94	□□□□□ -0.34
ARF3-208	ENST00000541959	GCSH	P23434	173 aa		12.94	□□□□□ -0.34
ARF3-208	ENST00000541959	DGAT2L7P	Q6IED9	249 aa		12.94	□□□□□ -0.34
ARF3-208	ENST00000541959	CLRN3	Q8NCR9	226 aa		12.94	□□□□□ -0.34
ARF3-208	ENST00000541959	PHOX2A	O14813	284 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms