RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 C16orf95Q9H693 158 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 MYO18BQ8IUG5 2567 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 TINCRA0A1B0GVN0 87 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 DNAJC9-AS1A6NH13 148 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 CD28P10747 220 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 ODF3L2Q3SX64 289 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 GAGE13Q4V321 117 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 MRPL16Q9NX20 251 aaKnown RBP7.17□□□□□ -1.26
LMO3-227ENST00000541764 ZNF462Q96JM2 2506 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 TRBV20-1A0A075B6N2 111 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 TSPAN13O95857 204 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 CFC1P0CG37 223 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 PROK1P58294 105 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 Q6ZSN1 163 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 ATP6V0E2Q8NHE4 81 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 RNF183Q96D59 192 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
LMO3-227ENST00000541764 A0A0B4J2C4 111 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 TRBV10-1A0A0K0K1A3 114 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 TEX48A0A1B0GUV7 120 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 TMEM238C9JI98 176 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 H3BMG7 143 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 J3QR89 54 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 TIRAPP58753 221 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 WFDC2Q14508 124 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 FAM19A3Q7Z5A8 133 aa7.16□□□□□ -1.26
LMO3-227ENST00000541764 UTP20O75691 2785 aaKnown RBP7.15□□□□□ -1.27
LMO3-227ENST00000541764 IGLV5-45A0A087WSX0 123 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.27
LMO3-227ENST00000541764 M0QXV9 152 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 CCL24O00175 119 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 RPL24P83731 157 aaKnown RBP7.15□□□□□ -1.27
LMO3-227ENST00000541764 COTL1Q14019 142 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 SBSPONQ8IVN8 264 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 STHQ8IWL8 128 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 C1orf158Q8N1D5 194 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 DEFB104AQ8WTQ1 72 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.27
LMO3-227ENST00000541764 TSSC4Q9Y5U2 329 aaPredicted RBP7.15□□□□□ -1.27
LMO3-227ENST00000541764 IGHV3-73A0A0B4J1V6 119 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 CIDEAO60543 219 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
LMO3-227ENST00000541764 IGHV3-30-3P0DP02 117 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 HTN1P15515 57 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 CSDC2Q9Y534 153 aaKnown RBP7.14□□□□□ -1.27
LMO3-227ENST00000541764 CREBBPQ92793 2442 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 PTPN13Q12923 2485 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 NAV2Q8IVL1 2488 aa7.14□□□□□ -1.27
LMO3-227ENST00000541764 NACAE9PAV3 2078 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 TIMM17BO60830 172 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 WFDC11Q8NEX6 87 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
LMO3-227ENST00000541764 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 LITAFQ99732 161 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 ESM1Q9NQ30 184 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 FAM208BQ5VWN6 2430 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 MXRA5Q9NR99 2828 aa7.13□□□□□ -1.27
LMO3-227ENST00000541764 CRYBG3Q68DQ2 2970 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 ZANQ9Y493 2812 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 TRAV4A0A0B4J268 109 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 APOMO95445 188 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 IGHV3-33P01772 117 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 PRM2P04554 102 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 SMAGPQ0VAQ4 97 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
LMO3-227ENST00000541764 Q9UF83 564 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 LRRK2Q5S007 2527 aa7.12□□□□□ -1.27
LMO3-227ENST00000541764 A4D1N5 150 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 AZU1P20160 251 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 ZFAND6Q6FIF0 208 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
LMO3-227ENST00000541764 MUSTN1Q8IVN3 82 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
LMO3-227ENST00000541764 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 SORL1Q92673 2214 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
LMO3-227ENST00000541764 NDUFA7O95182 113 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 IFITM1P13164 125 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 Q6ZUT4 128 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 LINC01006Q8NI28 216 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 SPATA25Q9BR10 227 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 NDUFA12Q9UI09 145 aa7.11□□□□□ -1.27
LMO3-227ENST00000541764 POLQO75417 2590 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
LMO3-227ENST00000541764 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 IGLV5-39A0A0G2JS06 123 aa7.1□□□□□ -1.27
LMO3-227ENST00000541764 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms