RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RAB32Q13637 225 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 TMEM97Q5BJF2 176 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 SAPCD1Q5SSQ6 148 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 MGST2Q99735 147 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 PRO1933Q9H354 126 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 TRBV24-1A0A075B6N3 115 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
YBX3-211ENST00000541351 CRYGAP11844 174 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 IQCJQ1A5X6 159 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 TMEM14EPQ6UXP3 125 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 LINC00269Q8N2A0 174 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 NDFIP1Q9BT67 221 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 CTDSP1Q9GZU7 261 aa5.74□□□□□ -1.49
YBX3-211ENST00000541351 LYRM2Q9NU23 88 aaPredicted RBP5.74□□□□□ -1.49
YBX3-211ENST00000541351 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 PGPEP1LA6NFU8 196 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 SSSCA1O60232 199 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 SRP19P09132 144 aaKnown RBP5.73□□□□□ -1.49
YBX3-211ENST00000541351 TRGC1P0CF51 173 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 PYYP10082 97 aa5.73□□□□□ -1.49
YBX3-211ENST00000541351 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
YBX3-211ENST00000541351 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
YBX3-211ENST00000541351 SLPIP03973 132 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 TRGC2P03986 189 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 CXCL1P09341 107 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 CFC1BP0CG36 223 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 S100A4P26447 101 aaKnown RBP5.72□□□□□ -1.49
YBX3-211ENST00000541351 RPL29P47914 159 aaKnown RBP5.72□□□□□ -1.49
YBX3-211ENST00000541351 TAS2R30P59541 319 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 RANP62826 216 aaKnown RBP5.72□□□□□ -1.49
YBX3-211ENST00000541351 ID3Q02535 119 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 REG3AQ06141 175 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 MIC13Q5XKP0 118 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 C14orf178Q8N769 122 aaPredicted RBP5.72□□□□□ -1.49
YBX3-211ENST00000541351 CMTM2Q8TAZ6 248 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 TMEM18Q96B42 140 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 BTF3L4Q96K17 158 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 SNHG12Q9BXW3 62 aa5.72□□□□□ -1.49
YBX3-211ENST00000541351 A0A096LNI7 61 aa5.71□□□□□ -1.5
YBX3-211ENST00000541351 H0Y9J4 135 aa5.71□□□□□ -1.5
YBX3-211ENST00000541351 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
YBX3-211ENST00000541351 MBPP02686 304 aaPredicted RBP5.71□□□□□ -1.5
YBX3-211ENST00000541351 G0S2P27469 103 aa5.71□□□□□ -1.5
YBX3-211ENST00000541351 IAH1Q2TAA2 248 aaPredicted RBP5.71□□□□□ -1.5
YBX3-211ENST00000541351 C1orf137Q5JT78 98 aa5.71□□□□□ -1.5
YBX3-211ENST00000541351 GSKIPQ9P0R6 139 aa5.71□□□□□ -1.5
YBX3-211ENST00000541351 TGIF2-C20orf24A0A0A6YYL0 155 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 UBE2D3P61077 147 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 UBE2D2P62837 147 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 TMEM241Q24JQ0 296 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 TSKUQ8WUA8 353 aa5.7□□□□□ -1.5
YBX3-211ENST00000541351 ZNF727A8MUV8 499 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 GHRHP01286 108 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 RBX1P62877 108 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 FAM162BQ5T6X4 162 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 FAM74A4Q5TZK3 123 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 FAM213BQ8TBF2 198 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 IMMP2LQ96T52 175 aa5.69□□□□□ -1.5
YBX3-211ENST00000541351 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 F6UZH7 168 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 TSPAN13O95857 204 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 BAXQ07812 192 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 PDZD11Q5EBL8 140 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 UFSP1Q6NVU6 142 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 SMIM3Q9BZL3 60 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 WFDC1Q9HC57 220 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 Q9UF83 564 aa5.68□□□□□ -1.5
YBX3-211ENST00000541351 LSM5Q9Y4Y9 91 aaKnown RBP5.68□□□□□ -1.5
YBX3-211ENST00000541351 XKRY2A2RUG3 117 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 IFNA1P01562 189 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 RNASE3P12724 160 aaKnown RBP5.67□□□□□ -1.5
YBX3-211ENST00000541351 ARL16Q0P5N6 197 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 COL5A1-AS1Q5SY13 56 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 OR10G8Q8NGN5 311 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 MIEN1Q9BRT3 115 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 SLC25A2Q9BXI2 301 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 WDR83OSQ9Y284 106 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 ZFP30Q9Y2G7 519 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 PHLDA3Q9Y5J5 127 aa5.67□□□□□ -1.5
YBX3-211ENST00000541351 OR7C2O60412 319 aa5.66□□□□□ -1.5
YBX3-211ENST00000541351 NPSP0C0P6 89 aa5.66□□□□□ -1.5
YBX3-211ENST00000541351 VAMP2P63027 116 aa5.66□□□□□ -1.5
YBX3-211ENST00000541351 OR2D3Q8NGH3 330 aa5.66□□□□□ -1.5
YBX3-211ENST00000541351 SERTM2A0A1B0GWG4 89 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 K7EQM0 130 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 FHITP49789 147 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 RPS20P60866 119 aaKnown RBP5.65□□□□□ -1.5
YBX3-211ENST00000541351 GAGE6Q13070 117 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 ORAOV1Q8WV07 137 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 FXYD5Q96DB9 178 aa5.65□□□□□ -1.5
YBX3-211ENST00000541351 C11orf1Q9H5F2 150 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms