RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SPATA12Q7Z6I5 190 aa3.83□□□□□ -1.8
SUDS3-202ENST00000541280 DAZ4Q86SG3 579 aaKnown RBP3.83□□□□□ -1.8
SUDS3-202ENST00000541280 WFDC10BQ8IUB3 73 aa3.83□□□□□ -1.8
SUDS3-202ENST00000541280 OR10G8Q8NGN5 311 aa3.83□□□□□ -1.8
SUDS3-202ENST00000541280 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
SUDS3-202ENST00000541280 SAMD10Q9BYL1 202 aa3.83□□□□□ -1.8
SUDS3-202ENST00000541280 DAZ3Q9NR90 486 aaKnown RBP3.83□□□□□ -1.8
SUDS3-202ENST00000541280 C19orf71A6NCJ1 209 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 RBFOX3A6NFN3 312 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 H7C423 109 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 TRGC1P0CF51 173 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 Q0VG73 95 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 PRR27Q6MZM9 219 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 C9orf62Q8N4C0 152 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
SUDS3-202ENST00000541280 FER1L6-AS1Q8NA97 138 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 OR2D3Q8NGH3 330 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 LYPD6BQ8NI32 183 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 FRZBQ92765 325 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 FAM210AQ96ND0 272 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 AP1S3Q96PC3 154 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 JPT2Q9H910 190 aa3.82□□□□□ -1.8
SUDS3-202ENST00000541280 A0A087WTM6 91 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 A0A087WX48 190 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 RAB19A4D1S5 217 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 IGLV2-8P01709 118 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 IGLC6P0CF74 106 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 UBE2D3P61077 147 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 UBE2D2P62837 147 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 SMIM15Q7Z3B0 74 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 OR10AG1Q8NH19 301 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 SMDT1Q9H4I9 107 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
SUDS3-202ENST00000541280 HYDINQ4G0P3 5121 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 TRBV6-8A0A0A6YYG3 113 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 A8MWL6 223 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 TMEM262E9PQX1 116 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 IGHV3-30P01768 117 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 IGHV3-33P01772 117 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 IGHV3-30-3P0DP02 117 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 IGHV3-30-5P0DP03 117 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 RPL19P84098 196 aaKnown RBP3.8□□□□□ -1.8
SUDS3-202ENST00000541280 ZNF56Q15929 161 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 FAM74A3Q4VXF1 159 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 TEX261Q6UWH6 196 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 FAM231DQ6ZW35 169 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 NIT1Q86X76 327 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 Q8N976 141 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 DERL1Q9BUN8 251 aa3.8□□□□□ -1.8
SUDS3-202ENST00000541280 EIF5A2Q9GZV4 153 aaKnown RBP3.8□□□□□ -1.8
SUDS3-202ENST00000541280 FAM231BA6NCW3 169 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 NTF3P20783 257 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 FOXA3P55318 350 aaPredicted RBP3.79□□□□□ -1.8
SUDS3-202ENST00000541280 ALKAL2Q6UX46 152 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 BORCS7Q96B45 105 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 CNFNQ9BYD5 112 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 DPH3P1Q9H4G8 78 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
SUDS3-202ENST00000541280 NIT2Q9NQR4 276 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
SUDS3-202ENST00000541280 TRBV20OR9-2A0A075B6H5 130 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 TRBV25-1A0A075B6N4 114 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 LRCOL1A6NCL2 159 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 M0QY20 66 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
SUDS3-202ENST00000541280 CTRLP40313 264 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 PEA15Q15121 130 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 IQCJQ1A5X6 159 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 RASL11AQ6T310 242 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 ATRAIDQ6UW56 229 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 LYZL1Q6UWQ5 148 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 Q8N814 137 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 C15orf54Q8N8G6 183 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 PGLYRP4Q96LB8 373 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 Q9HAA7 133 aa3.78□□□□□ -1.8
SUDS3-202ENST00000541280 IGHV1-24A0A0C4DH33 117 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 MUC21A0A0G2JKD1 596 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 MUC21A0A140T8X8 626 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 ZNF727A8MUV8 499 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 NCR2O95944 276 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 PPP1R17O96001 155 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 CRPP02741 224 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 MGPP08493 103 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 GZMBP10144 247 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 SSTP61278 116 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 MIAQ16674 131 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 TMEM241Q24JQ0 296 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 TSKUQ8WUA8 353 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 SMIM7Q9BQ49 75 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 OSTCQ9NRP0 149 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms