RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CACNA1BQ00975 2339 aa11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 CCDC179H3BU77 68 aa11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 PRB1P04280 392 aa11.28□□□□□ -0.6
SMARCA4-207ENST00000541122 SPART-AS1P0CW21 52 aa11.27□□□□□ -0.6
SMARCA4-207ENST00000541122 BPY2O14599 106 aa11.27□□□□□ -0.61
SMARCA4-207ENST00000541122 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
SMARCA4-207ENST00000541122 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■■■■□ 21.9
SMARCA4-207ENST00000541122 M0QY20 66 aa11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
SMARCA4-207ENST00000541122 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
SMARCA4-207ENST00000541122 C10orf105Q8TEF2 133 aa11.25□□□□□ -0.61
SMARCA4-207ENST00000541122 A6NDX4 124 aa11.25□□□□□ -0.61
SMARCA4-207ENST00000541122 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
SMARCA4-207ENST00000541122 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 FBXL19-AS1Q494R0 122 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 ENHOQ6UWT2 76 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 CLUHP3Q96NS8 147 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 PCNX1Q96RV3 2341 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 INSL3P51460 131 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 EBI3Q14213 229 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
SMARCA4-207ENST00000541122 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
SMARCA4-207ENST00000541122 ABCA4P78363 2273 aa11.23□□□□□ -0.61
SMARCA4-207ENST00000541122 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
SMARCA4-207ENST00000541122 IGF1P05019 195 aa11.23□□□□□ -0.61
SMARCA4-207ENST00000541122 DYSFO75923 2080 aa11.22□□□□□ -0.61
SMARCA4-207ENST00000541122 K7EQG2 157 aa11.22□□□□□ -0.61
SMARCA4-207ENST00000541122 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
SMARCA4-207ENST00000541122 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
SMARCA4-207ENST00000541122 V9GYY9 64 aa11.22□□□□□ -0.61
SMARCA4-207ENST00000541122 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.61
SMARCA4-207ENST00000541122 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
SMARCA4-207ENST00000541122 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
SMARCA4-207ENST00000541122 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.61
SMARCA4-207ENST00000541122 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.62
SMARCA4-207ENST00000541122 Q6JHZ5 121 aa11.21□□□□□ -0.62
SMARCA4-207ENST00000541122 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.62
SMARCA4-207ENST00000541122 DAZAP2Q15038 168 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-207ENST00000541122 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
SMARCA4-207ENST00000541122 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-207ENST00000541122 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
SMARCA4-207ENST00000541122 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-207ENST00000541122 TSHBP01222 138 aa11.18□□□□□ -0.62
SMARCA4-207ENST00000541122 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-207ENST00000541122 UBE2D1P51668 147 aa11.18□□□□□ -0.62
SMARCA4-207ENST00000541122 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
SMARCA4-207ENST00000541122 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
SMARCA4-207ENST00000541122 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
SMARCA4-207ENST00000541122 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
SMARCA4-207ENST00000541122 Q6ZS46 218 aa11.16□□□□□ -0.62
SMARCA4-207ENST00000541122 MED13LQ71F56 2210 aa11.16□□□□□ -0.62
SMARCA4-207ENST00000541122 UBE2D3P61077 147 aa11.16□□□□□ -0.62
SMARCA4-207ENST00000541122 UBE2D2P62837 147 aa11.16□□□□□ -0.62
SMARCA4-207ENST00000541122 ADORA2A-AS1P86434 159 aa11.16□□□□□ -0.62
SMARCA4-207ENST00000541122 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 TNCP24821 2201 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 NUP210LQ5VU65 1888 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 PCNX3Q9H6A9 2034 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 SLPIP03973 132 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 LINC00526Q96FQ7 95 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 KLK12Q9UKR0 248 aa11.15□□□□□ -0.62
SMARCA4-207ENST00000541122 A0A1W2PNU3 283 aaPredicted RBP11.15□□□□□ -0.63
SMARCA4-207ENST00000541122 Q6ZTI0 123 aa11.14□□□□□ -0.63
SMARCA4-207ENST00000541122 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
SMARCA4-207ENST00000541122 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
SMARCA4-207ENST00000541122 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
SMARCA4-207ENST00000541122 M0QXV9 152 aa11.13□□□□□ -0.63
SMARCA4-207ENST00000541122 PLCE1Q9P212 2302 aa11.13□□□□□ -0.63
SMARCA4-207ENST00000541122 SMIM26A0A096LP01 95 aa11.13□□□□□ -0.63
SMARCA4-207ENST00000541122 CCL18P55774 89 aa11.13□□□□□ -0.63
SMARCA4-207ENST00000541122 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
SMARCA4-207ENST00000541122 KLLNB2CW77 178 aa11.12□□□□□ -0.63
SMARCA4-207ENST00000541122 REG3AQ06141 175 aa11.12□□□□□ -0.63
SMARCA4-207ENST00000541122 CLPSL1A2RUU4 121 aa11.12□□□□□ -0.63
SMARCA4-207ENST00000541122 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
SMARCA4-207ENST00000541122 PCNX2A6NKB5 2137 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 LMO4P61968 165 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 CHCHD10Q8WYQ3 142 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 UBE2D4Q9Y2X8 147 aa11.11□□□□□ -0.63
SMARCA4-207ENST00000541122 ATG2AQ2TAZ0 1938 aa11.1□□□□□ -0.63
SMARCA4-207ENST00000541122 LTBP2Q14767 1821 aa11.1□□□□□ -0.63
SMARCA4-207ENST00000541122 UBE2AP49459 152 aa11.1□□□□□ -0.63
SMARCA4-207ENST00000541122 GAS8-AS1O95177 125 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms