RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 A0A1B0GUV1 79 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 hDV102S1A0JD36 115 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 F2Z2F3 143 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 GNG4P50150 75 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 GFRA4Q9GZZ7 299 aa9.04□□□□□ -0.96
SNHG1-213ENST00000540725 RAB5CP51148 216 aa9.03□□□□□ -0.96
SNHG1-213ENST00000540725 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-213ENST00000540725 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
SNHG1-213ENST00000540725 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
SNHG1-213ENST00000540725 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
SNHG1-213ENST00000540725 NIT2Q9NQR4 276 aa9.03□□□□□ -0.96
SNHG1-213ENST00000540725 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
SNHG1-213ENST00000540725 TRBV20OR9-2A0A075B6H5 130 aa9.02□□□□□ -0.97
SNHG1-213ENST00000540725 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
SNHG1-213ENST00000540725 IFNA1P01562 189 aa9.02□□□□□ -0.97
SNHG1-213ENST00000540725 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
SNHG1-213ENST00000540725 IGHV3-64A0A075B6Q5 118 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-213ENST00000540725 UBE2L6O14933 153 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 PDE6DO43924 150 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 NTF3P20783 257 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 COTL1Q14019 142 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 EIF5AL1Q6IS14 154 aaKnown RBP9.01□□□□□ -0.97
SNHG1-213ENST00000540725 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
SNHG1-213ENST00000540725 SLPIP03973 132 aa9□□□□□ -0.97
SNHG1-213ENST00000540725 CTRLP40313 264 aa9□□□□□ -0.97
SNHG1-213ENST00000540725 AMTP48728 403 aa9□□□□□ -0.97
SNHG1-213ENST00000540725 SULT1A2P50226 295 aa9□□□□□ -0.97
SNHG1-213ENST00000540725 WDR73Q6P4I2 378 aa9□□□□□ -0.97
SNHG1-213ENST00000540725 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-213ENST00000540725 A0A087WYN8 130 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 BCL2P10415 239 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 NUDT10Q8NFP7 164 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 DPH3Q96FX2 82 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 NUDT11Q96G61 164 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 RNF185Q96GF1 192 aa8.99□□□□□ -0.97
SNHG1-213ENST00000540725 TWIST1Q15672 202 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 Q6ZRU5 148 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 GATD1Q8NB37 220 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 CNFNQ9BYD5 112 aa8.98□□□□□ -0.97
SNHG1-213ENST00000540725 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
SNHG1-213ENST00000540725 IGKV3OR2-268A0A0C4DH90 116 aa8.97□□□□□ -0.97
SNHG1-213ENST00000540725 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
SNHG1-213ENST00000540725 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
SNHG1-213ENST00000540725 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
SNHG1-213ENST00000540725 CFAP161Q6P656 301 aa8.96□□□□□ -0.98
SNHG1-213ENST00000540725 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
SNHG1-213ENST00000540725 BLOC1S1P78537 153 aa8.95□□□□□ -0.98
SNHG1-213ENST00000540725 AMMECR1LQ6DCA0 310 aa8.95□□□□□ -0.98
SNHG1-213ENST00000540725 RPL39LQ96EH5 51 aaKnown RBP8.95□□□□□ -0.98
SNHG1-213ENST00000540725 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
SNHG1-213ENST00000540725 K7EN84 100 aa8.94□□□□□ -0.98
SNHG1-213ENST00000540725 NCR2O95944 276 aa8.94□□□□□ -0.98
SNHG1-213ENST00000540725 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
SNHG1-213ENST00000540725 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
SNHG1-213ENST00000540725 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
SNHG1-213ENST00000540725 CHCHD10Q8WYQ3 142 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-213ENST00000540725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-213ENST00000540725 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-213ENST00000540725 PHOX2AO14813 284 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 APCSP02743 223 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 COX6A2Q02221 97 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 C10orf91Q5T1B1 145 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 RNASEKQ6P5S7 137 aaKnown RBP8.93□□□□□ -0.98
SNHG1-213ENST00000540725 LYPD6BQ8NI32 183 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 OCC1Q8TAD7 63 aa8.93□□□□□ -0.98
SNHG1-213ENST00000540725 TNXBP22105 4242 aa8.92□□□□□ -0.98
SNHG1-213ENST00000540725 FOXA3P55318 350 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-213ENST00000540725 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
SNHG1-213ENST00000540725 PRSS3P2Q8NHM4 247 aa8.92□□□□□ -0.98
SNHG1-213ENST00000540725 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
SNHG1-213ENST00000540725 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
SNHG1-213ENST00000540725 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
SNHG1-213ENST00000540725 TMEM218A2RU14 115 aa8.91□□□□□ -0.98
SNHG1-213ENST00000540725 SDHAF1A6NFY7 115 aa8.91□□□□□ -0.98
SNHG1-213ENST00000540725 H7C423 109 aa8.91□□□□□ -0.98
SNHG1-213ENST00000540725 NDUFS6O75380 124 aaKnown RBP8.91□□□□□ -0.98
SNHG1-213ENST00000540725 FGF6P10767 208 aa8.91□□□□□ -0.98
SNHG1-213ENST00000540725 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-213ENST00000540725 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
SNHG1-213ENST00000540725 CARHSP1Q9Y2V2 147 aaKnown RBP8.9□□□□□ -0.98
SNHG1-213ENST00000540725 GATCO43716 136 aaKnown RBP8.89□□□□□ -0.99
SNHG1-213ENST00000540725 FOXI1Q12951 378 aa8.89□□□□□ -0.99
SNHG1-213ENST00000540725 SEC11CQ9BY50 192 aa8.89□□□□□ -0.99
SNHG1-213ENST00000540725 ZNF25P17030 456 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-213ENST00000540725 PMCHP20382 165 aa8.88□□□□□ -0.99
SNHG1-213ENST00000540725 SVBPQ8N300 66 aa8.88□□□□□ -0.99
SNHG1-213ENST00000540725 STPG4Q8N801 248 aa8.88□□□□□ -0.99
SNHG1-213ENST00000540725 OR5A1Q8NGJ0 315 aa8.88□□□□□ -0.99
SNHG1-213ENST00000540725 SMDT1Q9H4I9 107 aa8.88□□□□□ -0.99
SNHG1-213ENST00000540725 A0A096LNI7 61 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 TRBV6-5A0A0K0K1A5 114 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms