RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ESM1Q9NQ30 184 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 IGLV2-18A0A075B6J9 118 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 A4D1N5 150 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
PHC1-208ENST00000540574 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
PHC1-208ENST00000540574 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 NDUFA12Q9UI09 145 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 ZNF580Q9UK33 172 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 E9PLD3 99 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 M0R2P5 195 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 SOCS3O14543 225 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 COX6CP09669 75 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 Q9UF83 564 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
PHC1-208ENST00000540574 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 OR13C6PQ8NH95 151 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 KLLNB2CW77 178 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
PHC1-208ENST00000540574 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
PHC1-208ENST00000540574 A8MWV9 139 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 COX8CQ7Z4L0 72 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 ZNF843Q8N446 348 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 M0QY20 66 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 RNASE1P07998 156 aaKnown RBP7.31□□□□□ -1.24
PHC1-208ENST00000540574 Q6YL49 198 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 MUSTN1Q8IVN3 82 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 H3BMM0 161 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 CRYGDP07320 174 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 GAGE6Q13070 117 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 PRIMA1Q86XR5 153 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
PHC1-208ENST00000540574 DEFB4AO15263 64 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 HIGD1BQ9P298 99 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 SIGMAR1Q99720 223 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 PRO1854Q9UHT4 67 aa7.3□□□□□ -1.24
PHC1-208ENST00000540574 DNAJC9-AS1A6NH13 148 aa7.29□□□□□ -1.24
PHC1-208ENST00000540574 Q6ZTI0 123 aa7.29□□□□□ -1.24
PHC1-208ENST00000540574 Q6ZUT4 128 aa7.29□□□□□ -1.24
PHC1-208ENST00000540574 POLR2KP53803 58 aaKnown RBP7.29□□□□□ -1.24
PHC1-208ENST00000540574 Q6ZSV7 163 aa7.29□□□□□ -1.24
PHC1-208ENST00000540574 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
PHC1-208ENST00000540574 IGHV4-4A0A075B6R2 117 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 RPL13AP40429 203 aaKnown RBP7.28□□□□□ -1.24
PHC1-208ENST00000540574 SMR3AQ99954 134 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 INSL3P51460 131 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 ZNF575Q86XF7 245 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 NDUFA7O95182 113 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 PFN2P35080 140 aa7.28□□□□□ -1.24
PHC1-208ENST00000540574 LINC00158P58513 81 aa7.27□□□□□ -1.24
PHC1-208ENST00000540574 TSPEAR-AS2P59090 65 aa7.27□□□□□ -1.24
PHC1-208ENST00000540574 TAL2Q16559 108 aa7.27□□□□□ -1.24
PHC1-208ENST00000540574 F8P00451 2351 aa7.27□□□□□ -1.24
PHC1-208ENST00000540574 RHODO00212 210 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 IGHV3-30-3P0DP02 117 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 TIMM17AQ99595 171 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 LINC00467Q9BRT7 94 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 TM2D2Q9BX73 214 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 IGLV4-3A0A075B6K6 122 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 F8W1H4 67 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 DEFB114Q30KQ6 69 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 A0A0J9YY99 117 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 RBMY1A1P0DJD3 496 aaKnown RBP7.27□□□□□ -1.25
PHC1-208ENST00000540574 RBMY1CP0DJD4 496 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 CRIP2P52943 208 aaPredicted RBP7.27□□□□□ -1.25
PHC1-208ENST00000540574 RBMY1FQ15415 496 aaKnown RBP7.27□□□□□ -1.25
PHC1-208ENST00000540574 RHOHQ15669 191 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 Q9H8V8 135 aa7.27□□□□□ -1.25
PHC1-208ENST00000540574 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 TSPAN13O95857 204 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 TSHBP01222 138 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 ZNF22P17026 224 aaPredicted RBP7.26□□□□□ -1.25
PHC1-208ENST00000540574 ZMAT4Q9H898 229 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 TRBV27A0A0K0K1C4 114 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 Q6ZSN1 163 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 CDKN2A-AS1Q9UH64 79 aa7.26□□□□□ -1.25
PHC1-208ENST00000540574 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 LGALS9O00182 355 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 C5orf38Q86SI9 138 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 CFC1BP0CG36 223 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 CFC1P0CG37 223 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 TRBV7-9A0A0J9YWB2 115 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 NDUFA11Q86Y39 141 aa7.25□□□□□ -1.25
PHC1-208ENST00000540574 APCP25054 2843 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 G3V4G9 280 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 LEPROTO15243 131 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 NTN5Q8WTR8 489 aaPredicted RBP7.24□□□□□ -1.25
PHC1-208ENST00000540574 C9orf85Q96MD7 179 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 TRBV7-3A0A075B6L6 115 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.24□□□□□ -1.25
PHC1-208ENST00000540574 LOC100131303A0A0U1RQF7 123 aa7.24□□□□□ -1.25
PHC1-208ENST00000540574 SLC25A20O43772 301 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms