RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RPL35P42766 123 aaKnown RBP7.87□□□□□ -1.15
COPS7A-211ENST00000540408 OR2D3Q8NGH3 330 aa7.87□□□□□ -1.15
COPS7A-211ENST00000540408 GFRA4Q9GZZ7 299 aa7.87□□□□□ -1.15
COPS7A-211ENST00000540408 PKIGQ9Y2B9 76 aa7.87□□□□□ -1.15
COPS7A-211ENST00000540408 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 AMMECR1LQ6DCA0 310 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 STPG4Q8N801 248 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
COPS7A-211ENST00000540408 PRR3P79522 188 aaKnown RBP7.85□□□□□ -1.15
COPS7A-211ENST00000540408 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
COPS7A-211ENST00000540408 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
COPS7A-211ENST00000540408 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
COPS7A-211ENST00000540408 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
COPS7A-211ENST00000540408 IFNA1P01562 189 aa7.84□□□□□ -1.15
COPS7A-211ENST00000540408 NTF3P20783 257 aa7.84□□□□□ -1.15
COPS7A-211ENST00000540408 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
COPS7A-211ENST00000540408 MANBALQ9NQG1 85 aa7.84□□□□□ -1.15
COPS7A-211ENST00000540408 A0A0J9YXV3 536 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 GNG4P50150 75 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
COPS7A-211ENST00000540408 CENPWQ5EE01 88 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 LYZL1Q6UWQ5 148 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
COPS7A-211ENST00000540408 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 BIN3Q9NQY0 253 aa7.83□□□□□ -1.16
COPS7A-211ENST00000540408 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 C19orf71A6NCJ1 209 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 G3V3Q6 166 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 H7C423 109 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 ZNF345Q14585 488 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
COPS7A-211ENST00000540408 GNG13Q9P2W3 67 aa7.82□□□□□ -1.16
COPS7A-211ENST00000540408 GVQW2A0A096LPI5 108 aaPredicted RBP7.81□□□□□ -1.16
COPS7A-211ENST00000540408 NCR2O95944 276 aa7.81□□□□□ -1.16
COPS7A-211ENST00000540408 CCL20P78556 96 aa7.81□□□□□ -1.16
COPS7A-211ENST00000540408 TWIST1Q15672 202 aa7.81□□□□□ -1.16
COPS7A-211ENST00000540408 C11orf52Q96A22 123 aa7.81□□□□□ -1.16
COPS7A-211ENST00000540408 A0A096LNI7 61 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 Q6ZRP5 223 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 C9orf62Q8N4C0 152 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 BTF3L4Q96K17 158 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 BATF3Q9NR55 127 aa7.8□□□□□ -1.16
COPS7A-211ENST00000540408 RAB19A4D1S5 217 aa7.79□□□□□ -1.16
COPS7A-211ENST00000540408 PDE6DO43924 150 aa7.79□□□□□ -1.16
COPS7A-211ENST00000540408 APCSP02743 223 aa7.79□□□□□ -1.16
COPS7A-211ENST00000540408 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
COPS7A-211ENST00000540408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
COPS7A-211ENST00000540408 IGHV1-58A0A0C4DH39 117 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
COPS7A-211ENST00000540408 HMSDA8MTL9 139 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 BCL2L11O43521 198 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 FGF6P10767 208 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
COPS7A-211ENST00000540408 TEX261Q6UWH6 196 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 OR5A1Q8NGJ0 315 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 CARD19Q96LW7 228 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 MED9Q9NWA0 146 aa7.78□□□□□ -1.16
COPS7A-211ENST00000540408 LRP2P98164 4655 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 TRAV1-1A0A0B4J248 108 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 CTRLP40313 264 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 XCL1P47992 114 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 FOXI1Q12951 378 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 ODF1Q14990 250 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 Q6ZNX1 250 aa7.77□□□□□ -1.17
COPS7A-211ENST00000540408 PMCHP20382 165 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 MEF2BQ02080 365 aaPredicted RBP7.76□□□□□ -1.17
COPS7A-211ENST00000540408 SRSF9Q13242 221 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPS7A-211ENST00000540408 SS18Q15532 418 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 RGS21Q2M5E4 152 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 EIF5AL1Q6IS14 154 aaKnown RBP7.76□□□□□ -1.17
COPS7A-211ENST00000540408 NUDT10Q8NFP7 164 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 NUDT11Q96G61 164 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
COPS7A-211ENST00000540408 TNXBP22105 4242 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 I3L3M4 83 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 CCL25O15444 150 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 SYCNQ0VAF6 134 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 ISOC2Q96AB3 205 aa7.75□□□□□ -1.17
COPS7A-211ENST00000540408 RPL39LQ96EH5 51 aaKnown RBP7.75□□□□□ -1.17
COPS7A-211ENST00000540408 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
COPS7A-211ENST00000540408 LINC00526Q96FQ7 95 aa7.74□□□□□ -1.17
COPS7A-211ENST00000540408 FAM210AQ96ND0 272 aa7.74□□□□□ -1.17
COPS7A-211ENST00000540408 RPP21Q9H633 154 aaKnown RBP7.74□□□□□ -1.17
COPS7A-211ENST00000540408 TRBV20OR9-2A0A075B6H5 130 aa7.73□□□□□ -1.17
COPS7A-211ENST00000540408 CD164L2Q6UWJ8 174 aa7.73□□□□□ -1.17
COPS7A-211ENST00000540408 MRAP2Q96G30 205 aa7.73□□□□□ -1.17
COPS7A-211ENST00000540408 LOC107984640A0A0U1RRK4 108 aa7.72□□□□□ -1.17
COPS7A-211ENST00000540408 GAS8-AS1O95177 125 aa7.72□□□□□ -1.17
COPS7A-211ENST00000540408 MALP21145 153 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms