RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
MDM2-226ENST00000540352 ECSCRQ19T08 205 aa3.42□□□□□ -1.86
MDM2-226ENST00000540352 UNQ9165/PRO28630Q6UXU0 137 aa3.42□□□□□ -1.86
MDM2-226ENST00000540352 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.42□□□□□ -1.86
MDM2-226ENST00000540352 TMEM167AQ8TBQ9 72 aa3.42□□□□□ -1.86
MDM2-226ENST00000540352 RPP25Q9BUL9 199 aaKnown RBP3.42□□□□□ -1.86
MDM2-226ENST00000540352 PRO3102Q9H379 93 aa3.42□□□□□ -1.86
MDM2-226ENST00000540352 USF3Q68DE3 2245 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 GON4LQ3T8J9 2241 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 IGKV1D-17A0A075B6S4 117 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 IGHV3-43A0A0B4J1X8 118 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 IGHV3-43DP0DP04 118 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 KRTAP24-1Q3LI83 254 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 RPL39P5Q59GN2 51 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 LCA10Q71F78 164 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 ABCA7Q8IZY2 2146 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 RMI2Q96E14 147 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
MDM2-226ENST00000540352 FER1L5A0AVI2 2057 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 DSCAMO60469 2012 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 IGLV9-49A0A0B4J1Y8 123 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 TRBV7-4A0A0J9YYF1 115 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 DEFB108AA8MXU0 73 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 TSHBP01222 138 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 LHBP01229 141 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 TRGV3P03979 118 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 SAA1P0DJI8 122 aaPredicted RBP3.4□□□□□ -1.87
MDM2-226ENST00000540352 SAA2P0DJI9 122 aaPredicted RBP3.4□□□□□ -1.87
MDM2-226ENST00000540352 FUSP35637 526 aaKnown RBP eCLIP3.4□□□□□ -1.87
MDM2-226ENST00000540352 B3GALT5-AS1P59052 145 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 LYZP61626 148 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 DEFB110Q30KQ9 67 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 FAM229BQ4G0N7 80 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 ZNF833PQ6ZTB9 187 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 CCL13Q99616 98 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 UBL5Q9BZL1 73 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 BPESC1Q9GZL8 116 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 UNC13CQ8NB66 2214 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 MED12Q93074 2177 aa3.4□□□□□ -1.87
MDM2-226ENST00000540352 PRRC2BQ5JSZ5 2229 aaKnown RBP3.39□□□□□ -1.87
MDM2-226ENST00000540352 WDR87Q6ZQQ6 2873 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 TRAV12-3A0A0B4J271 114 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 IGHV1-18A0A0C4DH31 117 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 F6UB75 175 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 H0YGX0 51 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 PATE4P0C8F1 98 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 UBE2AP49459 152 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 SPANXN1Q5VSR9 72 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 ATP11AUNQ6ZP68 121 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 OPRPNQ99935 248 aaPredicted RBP3.39□□□□□ -1.87
MDM2-226ENST00000540352 Q9H8V8 135 aa3.39□□□□□ -1.87
MDM2-226ENST00000540352 MRPL36Q9P0J6 103 aaKnown RBP3.39□□□□□ -1.87
MDM2-226ENST00000540352 A0A087WW49 117 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 IGHV7-4-1A0A0J9YVY3 117 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 hDV103S1A0JD37 113 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 IGLV3-19P01714 112 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 IGHV3-30-3P0DP02 117 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 WT1-ASQ06250 92 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 C15orf32Q32M92 178 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 C14orf132Q9NPU4 83 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 NDUFA12Q9UI09 145 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 BRWD1Q9NSI6 2320 aa3.38□□□□□ -1.87
MDM2-226ENST00000540352 DIDO1Q9BTC0 2240 aaKnown RBP3.37□□□□□ -1.87
MDM2-226ENST00000540352 VCANP13611 3396 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 INTS1Q8N201 2190 aaKnown RBP3.37□□□□□ -1.87
MDM2-226ENST00000540352 KNTC1P50748 2209 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 IGKV2-40A0A087WW87 121 aaPredicted RBP3.37□□□□□ -1.87
MDM2-226ENST00000540352 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 IGKV2D-40P01614 121 aaPredicted RBP3.37□□□□□ -1.87
MDM2-226ENST00000540352 CXCL6P80162 114 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 Q8N6K4 173 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 TMEM254Q8TBM7 123 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 DEFB126Q9BYW3 111 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 CXXC4Q9H2H0 198 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 LINC00574Q9H8X3 128 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 ESM1Q9NQ30 184 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 CCL26Q9Y258 94 aa3.37□□□□□ -1.87
MDM2-226ENST00000540352 NACAE9PAV3 2078 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 IGHV3-15A0A0B4J1V0 119 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 IGKV3D-20A0A0C4DH25 116 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 C5orf67F2Z3F1 127 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 NDUFA1O15239 70 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 CGB3P0DN86 165 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 CGB7P0DN87 165 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
MDM2-226ENST00000540352 Q6ZRP5 223 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 LINC01560Q8TB33 94 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 DEC1Q9P2X7 70 aa3.36□□□□□ -1.87
MDM2-226ENST00000540352 POLEQ07864 2286 aa3.35□□□□□ -1.87
MDM2-226ENST00000540352 ZNF407Q9C0G0 2248 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms