RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.87□□□□□ -1.31
DDB1-214ENST00000539426 PHOX2AO14813 284 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 AMTP48728 403 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 RNF185Q96GF1 192 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 DPH3P1Q9H4G8 78 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
DDB1-214ENST00000539426 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 F2Z2F3 143 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 UBE2L6O14933 153 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 IFNA1P01562 189 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 TRGC1P0CF51 173 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 NTF3P20783 257 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 GNG4P50150 75 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 SULT1A2P50226 295 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 COX6A2Q02221 97 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 COTL1Q14019 142 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
DDB1-214ENST00000539426 TRAV26-2A0A0B4J265 109 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 XKRY2A2RUG3 117 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 CTRLP40313 264 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 EIF5AP63241 154 aaKnown RBP6.85□□□□□ -1.31
DDB1-214ENST00000539426 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 GATD1Q8NB37 220 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 SMIM12Q96EX1 92 aa6.85□□□□□ -1.31
DDB1-214ENST00000539426 IGKV2-24A0A0C4DH68 120 aa6.84□□□□□ -1.31
DDB1-214ENST00000539426 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
DDB1-214ENST00000539426 ODF1Q14990 250 aa6.84□□□□□ -1.31
DDB1-214ENST00000539426 Q6ZNX1 250 aa6.84□□□□□ -1.31
DDB1-214ENST00000539426 C9orf62Q8N4C0 152 aa6.84□□□□□ -1.31
DDB1-214ENST00000539426 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
DDB1-214ENST00000539426 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
DDB1-214ENST00000539426 RPS10P46783 165 aaKnown RBP6.83□□□□□ -1.32
DDB1-214ENST00000539426 PRR3P79522 188 aaKnown RBP6.83□□□□□ -1.32
DDB1-214ENST00000539426 MAJINQ3KP22 176 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 CFAP161Q6P656 301 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 NUDT10Q8NFP7 164 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
DDB1-214ENST00000539426 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
DDB1-214ENST00000539426 NUDT11Q96G61 164 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 MED9Q9NWA0 146 aa6.83□□□□□ -1.32
DDB1-214ENST00000539426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
DDB1-214ENST00000539426 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
DDB1-214ENST00000539426 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
DDB1-214ENST00000539426 PDE6DO43924 150 aa6.82□□□□□ -1.32
DDB1-214ENST00000539426 BCL2P10415 239 aa6.82□□□□□ -1.32
DDB1-214ENST00000539426 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
DDB1-214ENST00000539426 TWIST1Q15672 202 aa6.82□□□□□ -1.32
DDB1-214ENST00000539426 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
DDB1-214ENST00000539426 A0A096LNI7 61 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 K7EN84 100 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 FOXI1Q12951 378 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 RNASEKQ6P5S7 137 aaKnown RBP6.81□□□□□ -1.32
DDB1-214ENST00000539426 STPG4Q8N801 248 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 RPP21Q9H633 154 aaKnown RBP6.81□□□□□ -1.32
DDB1-214ENST00000539426 BIN3Q9NQY0 253 aa6.81□□□□□ -1.32
DDB1-214ENST00000539426 TEX46H3BTG2 121 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 APCSP02743 223 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 FGF6P10767 208 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 LYPD6BQ8NI32 183 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
DDB1-214ENST00000539426 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
DDB1-214ENST00000539426 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
DDB1-214ENST00000539426 NCR2O95944 276 aa6.79□□□□□ -1.32
DDB1-214ENST00000539426 OCC1Q8TAD7 63 aa6.79□□□□□ -1.32
DDB1-214ENST00000539426 H7C423 109 aa6.78□□□□□ -1.32
DDB1-214ENST00000539426 GAS8-AS1O95177 125 aa6.78□□□□□ -1.32
DDB1-214ENST00000539426 XCL1P47992 114 aa6.78□□□□□ -1.32
DDB1-214ENST00000539426 EIF5AL1Q6IS14 154 aaKnown RBP6.78□□□□□ -1.32
DDB1-214ENST00000539426 CCL25O15444 150 aa6.77□□□□□ -1.33
DDB1-214ENST00000539426 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
DDB1-214ENST00000539426 A0A0J9YXV3 536 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 LINC00959A0A1B0GUT2 108 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 TSHBP01222 138 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 ESDP10768 282 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
DDB1-214ENST00000539426 CARD19Q96LW7 228 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
DDB1-214ENST00000539426 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 I3L3M4 83 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
DDB1-214ENST00000539426 PMCHP20382 165 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 TEX261Q6UWH6 196 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 SMIM15Q7Z3B0 74 aa6.75□□□□□ -1.33
DDB1-214ENST00000539426 TAGLN2P37802 199 aaKnown RBP6.74□□□□□ -1.33
DDB1-214ENST00000539426 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
DDB1-214ENST00000539426 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
DDB1-214ENST00000539426 SLC51BQ86UW2 128 aa6.74□□□□□ -1.33
DDB1-214ENST00000539426 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
DDB1-214ENST00000539426 BTF3L4Q96K17 158 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms