RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C2orf91Q6ZV80 131 aa10.09□□□□□ -0.79
ACTN1-205ENST00000538545 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
ACTN1-205ENST00000538545 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
ACTN1-205ENST00000538545 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
ACTN1-205ENST00000538545 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
ACTN1-205ENST00000538545 F8VRH5 84 aa10.08□□□□□ -0.8
ACTN1-205ENST00000538545 H7C1H1 209 aa10.08□□□□□ -0.8
ACTN1-205ENST00000538545 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
ACTN1-205ENST00000538545 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 GAGE1Q13065 139 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 GAGE4Q13068 117 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 GAGE5Q13069 117 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
ACTN1-205ENST00000538545 K7EMI3 77 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 C16orf74Q96GX8 76 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 INSL3P51460 131 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 FAM104AQ969W3 186 aa10.06□□□□□ -0.8
ACTN1-205ENST00000538545 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
ACTN1-205ENST00000538545 RHODO00212 210 aa10.05□□□□□ -0.8
ACTN1-205ENST00000538545 MRPS16Q9Y3D3 137 aaKnown RBP10.05□□□□□ -0.8
ACTN1-205ENST00000538545 X6R8D5 127 aa10.05□□□□□ -0.8
ACTN1-205ENST00000538545 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
ACTN1-205ENST00000538545 CST9LQ9H4G1 147 aa10.05□□□□□ -0.8
ACTN1-205ENST00000538545 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
ACTN1-205ENST00000538545 BOD1L2Q8IYS8 172 aa10.04□□□□□ -0.8
ACTN1-205ENST00000538545 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
ACTN1-205ENST00000538545 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
ACTN1-205ENST00000538545 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 PTH2Q96A98 100 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 K7EQD1 137 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 PMVKQ15126 192 aa10.03□□□□□ -0.8
ACTN1-205ENST00000538545 K7EP13 123 aa10.02□□□□□ -0.8
ACTN1-205ENST00000538545 LINC00694P0DN24 101 aa10.02□□□□□ -0.8
ACTN1-205ENST00000538545 RHOHQ15669 191 aa10.02□□□□□ -0.8
ACTN1-205ENST00000538545 WFDC9Q8NEX5 89 aa10.02□□□□□ -0.8
ACTN1-205ENST00000538545 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-205ENST00000538545 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 EDA2RQ9HAV5 297 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 IGHV4-30-4P0DP06 118 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 PLNP26678 52 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 KRTAP10-11P60412 298 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
ACTN1-205ENST00000538545 MGAM2Q2M2H8 2515 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 G0S2P27469 103 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 COTL1Q14019 142 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 PCP4P48539 62 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
ACTN1-205ENST00000538545 A0A096LPF7 62 aa10□□□□□ -0.81
ACTN1-205ENST00000538545 Q6ZUT4 128 aa10□□□□□ -0.81
ACTN1-205ENST00000538545 OR11H2Q8NH07 326 aa10□□□□□ -0.81
ACTN1-205ENST00000538545 OVOL2Q9BRP0 275 aa10□□□□□ -0.81
ACTN1-205ENST00000538545 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 PRADC1Q9BSG0 188 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 RPL36AP83881 106 aaKnown RBP9.99□□□□□ -0.81
ACTN1-205ENST00000538545 FHL2Q14192 279 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 RPL36ALQ969Q0 106 aaKnown RBP9.99□□□□□ -0.81
ACTN1-205ENST00000538545 VCX2Q9H322 139 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
ACTN1-205ENST00000538545 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-205ENST00000538545 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
ACTN1-205ENST00000538545 TSPEAR-AS2P59090 65 aa9.98□□□□□ -0.81
ACTN1-205ENST00000538545 LBHQ53QV2 105 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-205ENST00000538545 RETNQ9HD89 108 aa9.98□□□□□ -0.81
ACTN1-205ENST00000538545 CELA1Q9UNI1 258 aa9.98□□□□□ -0.81
ACTN1-205ENST00000538545 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
ACTN1-205ENST00000538545 IGHV4-28A0A0C4DH34 117 aa9.97□□□□□ -0.81
ACTN1-205ENST00000538545 UBE2D3P61077 147 aa9.97□□□□□ -0.81
ACTN1-205ENST00000538545 UBE2D2P62837 147 aa9.97□□□□□ -0.81
ACTN1-205ENST00000538545 G3V4G9 280 aa9.96□□□□□ -0.81
ACTN1-205ENST00000538545 CFAP161Q6P656 301 aa9.96□□□□□ -0.81
ACTN1-205ENST00000538545 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.81
ACTN1-205ENST00000538545 NAA38Q9BRA0 125 aaKnown RBP9.96□□□□□ -0.81
ACTN1-205ENST00000538545 A8MZ25 164 aa9.96□□□□□ -0.82
ACTN1-205ENST00000538545 TMEM97Q5BJF2 176 aa9.96□□□□□ -0.82
ACTN1-205ENST00000538545 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.82
ACTN1-205ENST00000538545 A0A0J9YY99 117 aa9.95□□□□□ -0.82
ACTN1-205ENST00000538545 C12orf54Q6X4T0 127 aa9.95□□□□□ -0.82
ACTN1-205ENST00000538545 TRAV8-3A0A0A6YYJ7 113 aa9.94□□□□□ -0.82
ACTN1-205ENST00000538545 GCSHP23434 173 aa9.94□□□□□ -0.82
ACTN1-205ENST00000538545 E9PLD3 99 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-205ENST00000538545 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 A6NJY4 79 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms