RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LGALS3P17931 250 aaKnown RBP18.07■□□□□ 0.48
RAB40C-204ENST00000538492 FHL3Q13643 280 aa18.07■□□□□ 0.48
RAB40C-204ENST00000538492 RNASE13Q5GAN3 156 aaKnown RBP18.07■□□□□ 0.48
RAB40C-204ENST00000538492 TMEM223A0PJW6 202 aa18.06■□□□□ 0.48
RAB40C-204ENST00000538492 ZNF22P17026 224 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-204ENST00000538492 AMELXQ99217 191 aa18.06■□□□□ 0.48
RAB40C-204ENST00000538492 NOTCH3Q9UM47 2321 aa18.06■□□□□ 0.48
RAB40C-204ENST00000538492 PIK3CD-AS1Q5SR53 167 aa18.05■□□□□ 0.48
RAB40C-204ENST00000538492 FAM104AQ969W3 186 aa18.05■□□□□ 0.48
RAB40C-204ENST00000538492 IGHV3-38A0A0C4DH36 116 aa18.05■□□□□ 0.48
RAB40C-204ENST00000538492 RHODO00212 210 aa18.05■□□□□ 0.48
RAB40C-204ENST00000538492 PGPEP1Q9NXJ5 209 aa18.05■□□□□ 0.48
RAB40C-204ENST00000538492 TMEM238LA0A1B0GVL6 79 aa18.04■□□□□ 0.48
RAB40C-204ENST00000538492 A6NJY4 79 aa18.04■□□□□ 0.48
RAB40C-204ENST00000538492 YAE1D1Q9NRH1 226 aa18.04■□□□□ 0.48
RAB40C-204ENST00000538492 H3BMG7 143 aa18.04■□□□□ 0.48
RAB40C-204ENST00000538492 KRTAP1-1Q07627 177 aa18.03■□□□□ 0.48
RAB40C-204ENST00000538492 LINC00467Q9BRT7 94 aa18.03■□□□□ 0.48
RAB40C-204ENST00000538492 SPXQ9BT56 116 aa18.03■□□□□ 0.48
RAB40C-204ENST00000538492 JMJD1CQ15652 2540 aa18.03■□□□□ 0.48
RAB40C-204ENST00000538492 SETXQ7Z333 2677 aaKnown RBP18.03■□□□□ 0.48
RAB40C-204ENST00000538492 PCP4P48539 62 aa18.03■□□□□ 0.48
RAB40C-204ENST00000538492 APOMO95445 188 aa18.02■□□□□ 0.48
RAB40C-204ENST00000538492 PYGO1Q9Y3Y4 419 aa18.02■□□□□ 0.48
RAB40C-204ENST00000538492 TRAV25A0A0B4J276 109 aa18.02■□□□□ 0.47
RAB40C-204ENST00000538492 C21orf62-AS1Q17RA5 79 aa18.02■□□□□ 0.47
RAB40C-204ENST00000538492 C1orf158Q8N1D5 194 aa18.02■□□□□ 0.47
RAB40C-204ENST00000538492 SLC25A29Q8N8R3 303 aa18.02■□□□□ 0.47
RAB40C-204ENST00000538492 PTH2Q96A98 100 aa18.02■□□□□ 0.47
RAB40C-204ENST00000538492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-204ENST00000538492 IGKV2-29A2NJV5 120 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-204ENST00000538492 LEPROTO15243 131 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 UBE2D1P51668 147 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 LINC01006Q8NI28 216 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 CHCHD7Q9BUK0 85 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 IGHV3-53P01767 116 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 BEAN1Q3B7T3 259 aa18.01■□□□□ 0.47
RAB40C-204ENST00000538492 SFTA2Q6UW10 78 aa18■□□□□ 0.47
RAB40C-204ENST00000538492 IGHV3-30P01768 117 aa17.99■□□□□ 0.47
RAB40C-204ENST00000538492 IGHV3-30-5P0DP03 117 aa17.99■□□□□ 0.47
RAB40C-204ENST00000538492 RPL24P83731 157 aaKnown RBP17.99■□□□□ 0.47
RAB40C-204ENST00000538492 MTURNQ8N3F0 131 aa17.99■□□□□ 0.47
RAB40C-204ENST00000538492 RS1O15537 224 aa17.98■□□□□ 0.47
RAB40C-204ENST00000538492 CLUHP3Q96NS8 147 aa17.98■□□□□ 0.47
RAB40C-204ENST00000538492 SPANXB1Q9NS25 103 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-204ENST00000538492 TSSC4Q9Y5U2 329 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-204ENST00000538492 TRGV1A0A0A0MS02 117 aa17.97■□□□□ 0.47
RAB40C-204ENST00000538492 UBE2D4Q9Y2X8 147 aa17.97■□□□□ 0.47
RAB40C-204ENST00000538492 HELZ2Q9BYK8 2649 aaKnown RBP17.97■□□□□ 0.47
RAB40C-204ENST00000538492 WFDC2Q14508 124 aa17.96■□□□□ 0.47
RAB40C-204ENST00000538492 ANK3Q12955 4377 aaKnown RBP17.96■□□□□ 0.47
RAB40C-204ENST00000538492 G3V4G9 280 aa17.96■□□□□ 0.47
RAB40C-204ENST00000538492 TSPAN13O95857 204 aa17.95■□□□□ 0.46
RAB40C-204ENST00000538492 MRPS36P82909 103 aaKnown RBP17.95■□□□□ 0.46
RAB40C-204ENST00000538492 COTL1Q14019 142 aa17.95■□□□□ 0.46
RAB40C-204ENST00000538492 NDUFA11Q86Y39 141 aa17.95■□□□□ 0.46
RAB40C-204ENST00000538492 TRAV8-3A0A0A6YYJ7 113 aa17.94■□□□□ 0.46
RAB40C-204ENST00000538492 TEX48A0A1B0GUV7 120 aa17.94■□□□□ 0.46
RAB40C-204ENST00000538492 ADARB2-AS1A8MUL3 147 aa17.94■□□□□ 0.46
RAB40C-204ENST00000538492 DNAJC30Q96LL9 226 aa17.94■□□□□ 0.46
RAB40C-204ENST00000538492 WFDC10AQ9H1F0 79 aa17.94■□□□□ 0.46
RAB40C-204ENST00000538492 RNASE1P07998 156 aaKnown RBP17.93■□□□□ 0.46
RAB40C-204ENST00000538492 Q6ZUT4 128 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 LOC107984156A0A0G2JMH3 177 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 F8W1H4 67 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 CFC1BP0CG36 223 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 CFC1P0CG37 223 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 IGHV3-30-3P0DP02 117 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 ARL17AQ8IVW1 177 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 TIMM21Q9BVV7 248 aa17.93■□□□□ 0.46
RAB40C-204ENST00000538492 C10orf126Q8N4M7 172 aa17.92■□□□□ 0.46
RAB40C-204ENST00000538492 SPANXA1Q9NS26 97 aa17.92■□□□□ 0.46
RAB40C-204ENST00000538492 Q6ZTI0 123 aa17.92■□□□□ 0.46
RAB40C-204ENST00000538492 CRYBA4P53673 196 aa17.91■□□□□ 0.46
RAB40C-204ENST00000538492 IL17DQ8TAD2 202 aa17.91■□□□□ 0.46
RAB40C-204ENST00000538492 GAGE13Q4V321 117 aa17.9■□□□□ 0.46
RAB40C-204ENST00000538492 UNC79Q9P2D8 2635 aa17.9■□□□□ 0.46
RAB40C-204ENST00000538492 C16orf95Q9H693 158 aa17.89■□□□□ 0.46
RAB40C-204ENST00000538492 PLA2G2AP14555 144 aa17.89■□□□□ 0.45
RAB40C-204ENST00000538492 SH2D6Q7Z4S9 175 aa17.88■□□□□ 0.45
RAB40C-204ENST00000538492 A4D1N5 150 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 A8MZ25 164 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 ETDBQ3ZM63 59 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 A0A0J9YXY3 114 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 TINCRA0A1B0GVN0 87 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 RPL35AP18077 110 aaKnown RBP17.87■□□□□ 0.45
RAB40C-204ENST00000538492 TMEM263Q8WUH6 116 aaKnown RBP17.87■□□□□ 0.45
RAB40C-204ENST00000538492 PRO0461Q9UI25 63 aa17.87■□□□□ 0.45
RAB40C-204ENST00000538492 GIG44P09565 113 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-204ENST00000538492 SPINK8P0C7L1 97 aa17.86■□□□□ 0.45
RAB40C-204ENST00000538492 NOP10Q9NPE3 64 aaKnown RBP17.86■□□□□ 0.45
RAB40C-204ENST00000538492 J3QKU1 62 aa17.86■□□□□ 0.45
RAB40C-204ENST00000538492 PSMB2P49721 201 aa17.86■□□□□ 0.45
RAB40C-204ENST00000538492 MUSTN1Q8IVN3 82 aa17.86■□□□□ 0.45
RAB40C-204ENST00000538492 IGHV1-58A0A0C4DH39 117 aa17.86■□□□□ 0.45
RAB40C-204ENST00000538492 DGAT2L7PQ6IED9 249 aa17.85■□□□□ 0.45
RAB40C-204ENST00000538492 C2CD3Q4AC94 2353 aa17.84■□□□□ 0.45
RAB40C-204ENST00000538492 TMEM238C9JI98 176 aa17.84■□□□□ 0.45
RAB40C-204ENST00000538492 UBE2D3P61077 147 aa17.84■□□□□ 0.45
RAB40C-204ENST00000538492 UBE2D2P62837 147 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms