RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 H7C423 109 aa12.65□□□□□ -0.38
SCARB1-205ENST00000538291 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
SCARB1-205ENST00000538291 SORL1Q92673 2214 aa12.65□□□□□ -0.38
SCARB1-205ENST00000538291 P0C879 139 aa12.65□□□□□ -0.38
SCARB1-205ENST00000538291 MYO18BQ8IUG5 2567 aa12.65□□□□□ -0.38
SCARB1-205ENST00000538291 MIAQ16674 131 aa12.64□□□□□ -0.39
SCARB1-205ENST00000538291 SMIM20Q8N5G0 67 aa12.64□□□□□ -0.39
SCARB1-205ENST00000538291 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
SCARB1-205ENST00000538291 LY6G6DO95868 133 aa12.63□□□□□ -0.39
SCARB1-205ENST00000538291 CDPF1Q6NVV7 123 aa12.63□□□□□ -0.39
SCARB1-205ENST00000538291 FAM19A1Q7Z5A9 133 aa12.63□□□□□ -0.39
SCARB1-205ENST00000538291 EBI3Q14213 229 aa12.63□□□□□ -0.39
SCARB1-205ENST00000538291 SEC61GP60059 68 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 C22orf34Q6ZV56 151 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
SCARB1-205ENST00000538291 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-205ENST00000538291 TRAV10A0A0B4J240 114 aa12.61□□□□□ -0.39
SCARB1-205ENST00000538291 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
SCARB1-205ENST00000538291 C11orf1Q9H5F2 150 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 HIST2H2BDQ6DRA6 164 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 A0A096LNI7 61 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 B5MCH6 92 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 IGKV4-1P06312 121 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 WFDC2Q14508 124 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
SCARB1-205ENST00000538291 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
SCARB1-205ENST00000538291 TNRC6AQ8NDV7 1962 aaKnown RBP12.59□□□□□ -0.39
SCARB1-205ENST00000538291 A0A0J9YXY3 114 aa12.59□□□□□ -0.39
SCARB1-205ENST00000538291 ADAMTS9Q9P2N4 1935 aa12.59□□□□□ -0.39
SCARB1-205ENST00000538291 C20orf173Q96LM9 149 aa12.59□□□□□ -0.39
SCARB1-205ENST00000538291 BPY2O14599 106 aa12.59□□□□□ -0.39
SCARB1-205ENST00000538291 C7orf33Q8WU49 177 aa12.58□□□□□ -0.39
SCARB1-205ENST00000538291 TRBV6-4A0A1B0GX49 114 aa12.58□□□□□ -0.4
SCARB1-205ENST00000538291 A0A1B0GXF2 115 aa12.58□□□□□ -0.4
SCARB1-205ENST00000538291 NEXN-AS1Q8NBZ9 246 aa12.58□□□□□ -0.4
SCARB1-205ENST00000538291 CRYGBP07316 175 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 LY6LH3BQJ8 138 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 BRWD1-AS2P59051 145 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
SCARB1-205ENST00000538291 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
SCARB1-205ENST00000538291 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
SCARB1-205ENST00000538291 FOXI1Q12951 378 aa12.56□□□□□ -0.4
SCARB1-205ENST00000538291 LINC00322Q6ZN03 302 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-205ENST00000538291 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
SCARB1-205ENST00000538291 ZFAND3Q9H8U3 227 aa12.56□□□□□ -0.4
SCARB1-205ENST00000538291 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
SCARB1-205ENST00000538291 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
SCARB1-205ENST00000538291 SPATA12Q7Z6I5 190 aa12.55□□□□□ -0.4
SCARB1-205ENST00000538291 HIVEP3Q5T1R4 2406 aa12.55□□□□□ -0.4
SCARB1-205ENST00000538291 FAM19A5Q7Z5A7 132 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-205ENST00000538291 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
SCARB1-205ENST00000538291 IGLV2-8P01709 118 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 LINC01006Q8NI28 216 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-205ENST00000538291 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 CASC2Q6XLA1 102 aa12.54□□□□□ -0.4
SCARB1-205ENST00000538291 TAX1BP3O14907 124 aa12.53□□□□□ -0.4
SCARB1-205ENST00000538291 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
SCARB1-205ENST00000538291 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
SCARB1-205ENST00000538291 PRR14LQ5THK1 2151 aa12.53□□□□□ -0.4
SCARB1-205ENST00000538291 PLXNB3Q9ULL4 1909 aa12.53□□□□□ -0.4
SCARB1-205ENST00000538291 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.4
SCARB1-205ENST00000538291 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
SCARB1-205ENST00000538291 XAGE1AQ9HD64 81 aa12.52□□□□□ -0.41
SCARB1-205ENST00000538291 M0QY20 66 aa12.51□□□□□ -0.41
SCARB1-205ENST00000538291 C2orf16Q68DN1 1984 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SCARB1-205ENST00000538291 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 Q8N976 141 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
SCARB1-205ENST00000538291 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 LINC00643Q86TS7 51 aa12.5□□□□□ -0.41
SCARB1-205ENST00000538291 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
SCARB1-205ENST00000538291 Q6ZPA2 131 aa12.49□□□□□ -0.41
SCARB1-205ENST00000538291 NAV3Q8IVL0 2385 aa12.49□□□□□ -0.41
SCARB1-205ENST00000538291 SS18L2Q9UHA2 77 aa12.49□□□□□ -0.41
SCARB1-205ENST00000538291 TMEM223A0PJW6 202 aa12.49□□□□□ -0.41
SCARB1-205ENST00000538291 EIF4EBP1Q13541 118 aaPredicted RBP12.48□□□□□ -0.41
SCARB1-205ENST00000538291 KPRPQ5T749 579 aaPredicted RBP12.48□□□□□ -0.41
SCARB1-205ENST00000538291 TCL1BO95988 128 aa12.48□□□□□ -0.41
SCARB1-205ENST00000538291 DSCAMO60469 2012 aa12.48□□□□□ -0.41
SCARB1-205ENST00000538291 NDUFC2O95298 119 aa12.48□□□□□ -0.41
SCARB1-205ENST00000538291 RBX1P62877 108 aa12.48□□□□□ -0.41
SCARB1-205ENST00000538291 COL4A3Q01955 1670 aa12.47□□□□□ -0.41
SCARB1-205ENST00000538291 PTH2Q96A98 100 aa12.47□□□□□ -0.41
SCARB1-205ENST00000538291 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
SCARB1-205ENST00000538291 USP17L23D6RBM5 183 aa12.47□□□□□ -0.41
SCARB1-205ENST00000538291 LINC00308Q8TCZ7 52 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms