RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 C11orf1Q9H5F2 150 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 COX11Q9Y6N1 276 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 IGLV1-40P01703 118 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 A0A087WZ39 114 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 RS1O15537 224 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 PCP4P48539 62 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
LRP6-203ENST00000538239 CFC1BP0CG36 223 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 CFC1P0CG37 223 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 LINC00322Q6ZN03 302 aaPredicted RBP3.99□□□□□ -1.77
LRP6-203ENST00000538239 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 CLUHP3Q96NS8 147 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 C19orf71A6NCJ1 209 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 FRMD6-AS1P0C7T7 363 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 CUL9Q8IWT3 2517 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 TRACP01848 142 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
LRP6-203ENST00000538239 C20orf203Q8NBC4 194 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 GOLGB1Q14789 3259 aaKnown RBP3.98□□□□□ -1.77
LRP6-203ENST00000538239 FUSP35637 526 aaKnown RBP eCLIP3.98□□□□□ -1.77
LRP6-203ENST00000538239 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 DIRC1Q969H9 104 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 NFE4Q86UQ8 179 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 C11orf86A6NJI1 115 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 NUPR1O60356 82 aa3.98□□□□□ -1.77
LRP6-203ENST00000538239 PRRC2AP48634 2157 aaKnown RBP3.97□□□□□ -1.77
LRP6-203ENST00000538239 H3BMG7 143 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 A0A1W2PPM0 123 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 BRI3O95415 125 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 FAM19A1Q7Z5A9 133 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 NOTCH3Q9UM47 2321 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 IGHV1-58A0A0C4DH39 117 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 A4D1N5 150 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 DLEU1O43261 78 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 EML5Q05BV3 1969 aa3.97□□□□□ -1.77
LRP6-203ENST00000538239 A0A096LNI7 61 aa3.96□□□□□ -1.77
LRP6-203ENST00000538239 IFITM1P13164 125 aa3.96□□□□□ -1.77
LRP6-203ENST00000538239 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.77
LRP6-203ENST00000538239 CRYBA4P53673 196 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 ANKRD39Q53RE8 183 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 KIR2DL5BA0A0G2JN68 375 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 KIR2DL5BA0A0G2JPC4 375 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 KIR2DL5AQ8N109 375 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 KIR2DL5BQ8NHK3 375 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 ARHGAP32A7KAX9 2087 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 Q8N976 141 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 K7EP34 96 aa3.96□□□□□ -1.78
LRP6-203ENST00000538239 TRBV6-4A0A1B0GX49 114 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 IGLV2-8P01709 118 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 MRPL52Q86TS9 123 aaKnown RBP3.95□□□□□ -1.78
LRP6-203ENST00000538239 PRR14LQ5THK1 2151 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 NDUFB1O75438 58 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 NTN5Q8WTR8 489 aaPredicted RBP3.95□□□□□ -1.78
LRP6-203ENST00000538239 PPDPFLQ8WWR9 84 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 ATG2AQ2TAZ0 1938 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 LINC01545Q5VT33 79 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 UFSP1Q6NVU6 142 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 LINC00526Q96FQ7 95 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 C16orf95Q9H693 158 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 COX7BP24311 80 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 CRIP1P50238 77 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 PRR9Q5T870 116 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 PLCE1Q9P212 2302 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 NUPR2A6NF83 97 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 H7C423 109 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 F8W1H4 67 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 IGLC6P0CF74 106 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 DCANP1Q8TF63 244 aa3.95□□□□□ -1.78
LRP6-203ENST00000538239 E9PLD3 99 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 H0YGX0 51 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 ETDBQ3ZM63 59 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 UBE2D1P51668 147 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 H0Y9J4 135 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 U3KQK5 164 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 Q6ZVH6 145 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 M0QY20 66 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 ODF1Q14990 250 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
LRP6-203ENST00000538239 G3V4G9 280 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 CDPF1Q6NVV7 123 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 ANKRD29Q8N6D5 301 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 LELP1Q5T871 98 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 NREPQ16612 68 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 HCFC1P51610 2035 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 FOXI1Q12951 378 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 MIAQ16674 131 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 RBX1P62877 108 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
LRP6-203ENST00000538239 EXPH5Q8NEV8 1989 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 RNASE3P12724 160 aaKnown RBP3.92□□□□□ -1.78
LRP6-203ENST00000538239 IGLV1-51P01701 117 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms