RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 RHODO00212 210 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
PTPRR-205ENST00000537619 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 SAP30O75446 220 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 TAL2Q16559 108 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-205ENST00000537619 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 RNASE8Q8TDE3 154 aaKnown RBP6.72□□□□□ -1.33
PTPRR-205ENST00000537619 AMELXQ99217 191 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 CHCHD7Q9BUK0 85 aa6.72□□□□□ -1.33
PTPRR-205ENST00000537619 NHP2Q9NX24 153 aaKnown RBP6.72□□□□□ -1.33
PTPRR-205ENST00000537619 SETD2Q9BYW2 2564 aaPredicted RBP6.71□□□□□ -1.33
PTPRR-205ENST00000537619 IGLV1-51P01701 117 aa6.71□□□□□ -1.34
PTPRR-205ENST00000537619 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
PTPRR-205ENST00000537619 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
PTPRR-205ENST00000537619 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.34
PTPRR-205ENST00000537619 SETXQ7Z333 2677 aaKnown RBP6.71□□□□□ -1.34
PTPRR-205ENST00000537619 IGHV3-38A0A0C4DH36 116 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 K7EP34 96 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 ZNF22P17026 224 aaPredicted RBP6.7□□□□□ -1.34
PTPRR-205ENST00000537619 HERVK_113P61574 105 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 HIVEP2P31629 2446 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 LY6G6DO95868 133 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
PTPRR-205ENST00000537619 FAM110AQ9BQ89 295 aa6.7□□□□□ -1.34
PTPRR-205ENST00000537619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
PTPRR-205ENST00000537619 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
PTPRR-205ENST00000537619 C12orf74Q32Q52 190 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 Q6ZTI0 123 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 OR5A1Q8NGJ0 315 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 DNAJC30Q96LL9 226 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 PYGO1Q9Y3Y4 419 aa6.69□□□□□ -1.34
PTPRR-205ENST00000537619 TRGV1A0A0A0MS02 117 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 A0A0J9YY99 117 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 SAMD5Q5TGI4 173 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 NDUFA11Q86Y39 141 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
PTPRR-205ENST00000537619 IGLL5B9A064 214 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
PTPRR-205ENST00000537619 Q6ZUT4 128 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 VCX2Q9H322 139 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 JMJD1CQ15652 2540 aa6.68□□□□□ -1.34
PTPRR-205ENST00000537619 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 J3QQQ9 107 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 RBX1P62877 108 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 SPATA3Q8NHX4 192 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
PTPRR-205ENST00000537619 C1QTNF4Q9BXJ3 329 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 HECTD1Q9ULT8 2610 aa6.67□□□□□ -1.34
PTPRR-205ENST00000537619 LEPROTO15243 131 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 PF4P02776 101 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 GAGE12BA1L429 117 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 MRPS36P82909 103 aaKnown RBP6.66□□□□□ -1.34
PTPRR-205ENST00000537619 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
PTPRR-205ENST00000537619 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
PTPRR-205ENST00000537619 TRAV4A0A0B4J268 109 aa6.65□□□□□ -1.34
PTPRR-205ENST00000537619 FABP2P12104 132 aa6.65□□□□□ -1.34
PTPRR-205ENST00000537619 UBE2D1P51668 147 aa6.65□□□□□ -1.34
PTPRR-205ENST00000537619 CRYBA4P53673 196 aa6.65□□□□□ -1.34
PTPRR-205ENST00000537619 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
PTPRR-205ENST00000537619 K7EQD1 137 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
PTPRR-205ENST00000537619 RNF151Q2KHN1 245 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 RRN3P1Q2M238 152 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 C10orf126Q8N4M7 172 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
PTPRR-205ENST00000537619 TRAV8-3A0A0A6YYJ7 113 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 LINC00694P0DN24 101 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
PTPRR-205ENST00000537619 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 C16orf74Q96GX8 76 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 VPS25Q9BRG1 176 aa6.64□□□□□ -1.35
PTPRR-205ENST00000537619 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
PTPRR-205ENST00000537619 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
PTPRR-205ENST00000537619 SRSF9Q13242 221 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPRR-205ENST00000537619 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
PTPRR-205ENST00000537619 NOTCH3Q9UM47 2321 aa6.63□□□□□ -1.35
PTPRR-205ENST00000537619 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
PTPRR-205ENST00000537619 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
PTPRR-205ENST00000537619 K7ERU9 68 aa6.62□□□□□ -1.35
PTPRR-205ENST00000537619 CIDEAO60543 219 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms