RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NDPQ00604 133 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 ARHGAP32A7KAX9 2087 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 MUC3AQ02505 3323 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3-35A0A0C4DH35 117 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 SDK1Q7Z5N4 2213 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 TRIOO75962 3097 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 A0A087WWL8 130 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 CFHR3Q02985 330 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 AHCTF1Q8WYP5 2266 aa6.25□□□□□ -1.41
SRGAP1-202ENST00000537556 TRAV13-2A0A0B4J235 113 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3-66A0A0C4DH42 116 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 CLPSL1A2RUU4 121 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 FAM110DQ8TAY7 271 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 F8WEM9 126 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 H0YGX0 51 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 IGF1P05019 195 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 NPBQ8NG41 125 aa6.24□□□□□ -1.41
SRGAP1-202ENST00000537556 FREM2Q5SZK8 3169 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 A8MZ25 164 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 M0QY20 66 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 CCL21O00585 134 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 BLCAPP62952 87 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 FAM74A4Q5TZK3 123 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 LYPD2Q6UXB3 125 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 FRYLO94915 3013 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 MED13Q9UHV7 2174 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 C1orf158Q8N1D5 194 aa6.23□□□□□ -1.41
SRGAP1-202ENST00000537556 CD164Q04900 197 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 SS18Q15532 418 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 KAAG1Q9UBP8 84 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3OR16-13A0A075B7E8 117 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3-74A0A0B4J1X5 117 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
SRGAP1-202ENST00000537556 CRPP02741 224 aa6.21□□□□□ -1.41
SRGAP1-202ENST00000537556 CADP27708 2225 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 TECTAO75443 2155 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 COX7A1P24310 79 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 ITLN2Q8WWU7 325 aaPredicted RBP6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 CCL17Q92583 94 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 Q9H8V8 135 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 SNRPD3P62318 126 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 Q6ZRU5 148 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 WFDC9Q8NEX5 89 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 RETNQ9HD89 108 aa6.21□□□□□ -1.42
SRGAP1-202ENST00000537556 ICE1Q9Y2F5 2266 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 PLAC8L1A1L4L8 177 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 NCR3O14931 201 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 C15orf32Q32M92 178 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 RMI2Q96E14 147 aa6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-202ENST00000537556 PIK3CD-AS1Q5SR53 167 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 SOSTDC1Q6X4U4 206 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 COL27A1Q8IZC6 1860 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 MOB4Q9Y3A3 225 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 MUC4Q99102 2169 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 A0A087WYN8 130 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 IGHV3-49A0A0A0MS15 119 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 CACNA1EQ15878 2313 aa6.19□□□□□ -1.42
SRGAP1-202ENST00000537556 ORMDL1Q9P0S3 153 aa6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 U3KQE9 123 aa6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 PRB3Q04118 309 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 DPM3Q9P2X0 92 aa6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 URB1O60287 2271 aaKnown RBP6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
SRGAP1-202ENST00000537556 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 RNASE13Q5GAN3 156 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 MIR7-3HGQ8N6C7 128 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 CFAP47Q6ZTR5 3102 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 LECT2O14960 151 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 SAA4P35542 130 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 CLEC19AQ6UXS0 136 aa6.17□□□□□ -1.42
SRGAP1-202ENST00000537556 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 IBA57-AS1B1ANH7 110 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 BPESC1Q9GZL8 116 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 CACNA1GO43497 2377 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 F6UB75 175 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 MIFP14174 115 aa6.16□□□□□ -1.42
SRGAP1-202ENST00000537556 TMEM89A2RUT3 159 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 WNK2Q9Y3S1 2297 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 ZZEF1O43149 2961 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 WDFY4Q6ZS81 3184 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 ESRGQ1W209 222 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 IGFL2Q6UWQ7 119 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 Q96MF0 132 aa6.15□□□□□ -1.42
SRGAP1-202ENST00000537556 MGAQ8IWI9 3026 aa6.15□□□□□ -1.43
SRGAP1-202ENST00000537556 KLLNB2CW77 178 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms