RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 TRAV8-4A0A0B4J246 113 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 PF4P02776 101 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 DNAL4O96015 105 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 A0A0J9YY99 117 aa9.63□□□□□ -0.87
PTPN21-202ENST00000536337 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
PTPN21-202ENST00000536337 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
PTPN21-202ENST00000536337 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
PTPN21-202ENST00000536337 TCL1BO95988 128 aa9.63□□□□□ -0.87
PTPN21-202ENST00000536337 RHOHQ15669 191 aa9.63□□□□□ -0.87
PTPN21-202ENST00000536337 FOXI1Q12951 378 aa9.63□□□□□ -0.87
PTPN21-202ENST00000536337 K7EQG2 157 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 M0QY20 66 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 RHODO00212 210 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
PTPN21-202ENST00000536337 LEPROTO15243 131 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 ZFAND6Q6FIF0 208 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
PTPN21-202ENST00000536337 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 A0A096LPF7 62 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 PFN2P35080 140 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 Q9H8V8 135 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 C1QTNF4Q9BXJ3 329 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 GAGE6Q13070 117 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
PTPN21-202ENST00000536337 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
PTPN21-202ENST00000536337 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
PTPN21-202ENST00000536337 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
PTPN21-202ENST00000536337 TRBV7-3A0A075B6L6 115 aa9.6□□□□□ -0.87
PTPN21-202ENST00000536337 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
PTPN21-202ENST00000536337 KLLNB2CW77 178 aa9.6□□□□□ -0.87
PTPN21-202ENST00000536337 ZNF580Q9UK33 172 aa9.6□□□□□ -0.87
PTPN21-202ENST00000536337 CRYGDP07320 174 aa9.59□□□□□ -0.87
PTPN21-202ENST00000536337 PAX4O43316 350 aa9.59□□□□□ -0.87
PTPN21-202ENST00000536337 PSMB8P28062 276 aa9.59□□□□□ -0.87
PTPN21-202ENST00000536337 TEN1Q86WV5 123 aa9.59□□□□□ -0.87
PTPN21-202ENST00000536337 Q6ZUT4 128 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
PTPN21-202ENST00000536337 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 IGLV1-40P01703 118 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 PRORYQ9H606 182 aa9.58□□□□□ -0.88
PTPN21-202ENST00000536337 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 CSMD1Q96PZ7 3565 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 J3QLI3 93 aa9.57□□□□□ -0.88
PTPN21-202ENST00000536337 H3BMM0 161 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 SOCS3O14543 225 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 CCL24O00175 119 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
PTPN21-202ENST00000536337 LGALS9O00182 355 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 HIST2H2BCQ6DN03 193 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 CFAP46Q8IYW2 2715 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 MT-ATP8P03928 68 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 HECTD1Q9ULT8 2610 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 TSHBP01222 138 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 MUC4Q99102 2169 aa9.55□□□□□ -0.88
PTPN21-202ENST00000536337 NXPH4O95158 308 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 C5orf38Q86SI9 138 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
PTPN21-202ENST00000536337 RS1O15537 224 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
PTPN21-202ENST00000536337 IGLV4-69A0A075B6H9 119 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 IGHV3-30P01768 117 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 IGHV3-30-5P0DP03 117 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 Q6ZTI0 123 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 ESM1Q9NQ30 184 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 CRPP02741 224 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 TRAV26-1A0A087WT03 109 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 TMEM223A0PJW6 202 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 Q6ZSV7 163 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
PTPN21-202ENST00000536337 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.88
PTPN21-202ENST00000536337 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.88
PTPN21-202ENST00000536337 KRTAP10-9P60411 292 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 DEFB113Q30KQ7 82 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.89
PTPN21-202ENST00000536337 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 Q9UF83 564 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 ICOSQ9Y6W8 199 aa9.52□□□□□ -0.89
PTPN21-202ENST00000536337 ZANQ9Y493 2812 aa9.51□□□□□ -0.89
PTPN21-202ENST00000536337 NDUFA7O95182 113 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms