RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 HAMPP81172 84 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 RHEBQ15382 184 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 TMEM97Q5BJF2 176 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 Q6ZSA8 131 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 DNAJC30Q96LL9 226 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 SAMD10Q9BYL1 202 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 GTSF1LQ9H1H1 148 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
LMO3-213ENST00000536172 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 ATP5L2Q7Z4Y8 100 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 URGCP-MRPS24S4R325 110 aa7.38□□□□□ -1.23
LMO3-213ENST00000536172 IGHV3-30P01768 117 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 IGHV3-33P01772 117 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 IGHV3-30-3P0DP02 117 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 IGHV3-30-5P0DP03 117 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 PKIAP61925 76 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 RASL11AQ6T310 242 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 TMEM191AQ9H0A3 160 aa7.37□□□□□ -1.23
LMO3-213ENST00000536172 MRPL54Q6P161 138 aaKnown RBP7.36□□□□□ -1.23
LMO3-213ENST00000536172 DAZ4Q86SG3 579 aaKnown RBP7.36□□□□□ -1.23
LMO3-213ENST00000536172 CLRN3Q8NCR9 226 aa7.36□□□□□ -1.23
LMO3-213ENST00000536172 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
LMO3-213ENST00000536172 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
LMO3-213ENST00000536172 DAZ3Q9NR90 486 aaKnown RBP7.36□□□□□ -1.23
LMO3-213ENST00000536172 CARHSP1Q9Y2V2 147 aaKnown RBP7.36□□□□□ -1.23
LMO3-213ENST00000536172 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 C7orf77A4D0Y5 90 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 CKS2P33552 79 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 COX19Q49B96 90 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 UFSP1Q6NVU6 142 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 RMI2Q96E14 147 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 TMEM242Q9NWH2 141 aa7.35□□□□□ -1.23
LMO3-213ENST00000536172 TMEM262E9PQX1 116 aa7.34□□□□□ -1.23
LMO3-213ENST00000536172 Q8N976 141 aa7.34□□□□□ -1.23
LMO3-213ENST00000536172 ST20Q9HBF5 79 aa7.34□□□□□ -1.23
LMO3-213ENST00000536172 A0A087WX48 190 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 M0QY20 66 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 UBE2L6O14933 153 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 PPBPP02775 128 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 ADCYAP1P18509 176 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 PMCHP20382 165 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 COTL1Q14019 142 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 C10orf91Q5T1B1 145 aa7.33□□□□□ -1.24
LMO3-213ENST00000536172 OXTP01178 125 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 SMAGPQ0VAQ4 97 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 ELOBQ15370 118 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 SLC7A5P1Q8MH63 180 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 NEXN-AS1Q8NBZ9 246 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 CHCHD5Q9BSY4 110 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
LMO3-213ENST00000536172 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.31□□□□□ -1.24
LMO3-213ENST00000536172 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 IGHV1-24A0A0C4DH33 117 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 TCAPO15273 167 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 LINC00694P0DN24 101 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 RAB4AP20338 218 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 FCER1GP30273 86 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 UBE2D3P61077 147 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 UBE2D2P62837 147 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 WFDC2Q14508 124 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 KIR2DL4Q99706 377 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
LMO3-213ENST00000536172 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 VCYO14598 125 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 RAB5AP20339 215 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
LMO3-213ENST00000536172 TMEM136Q6ZRR5 245 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 ORMDL3Q8N138 153 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 CHCHD7Q9BUK0 85 aa7.3□□□□□ -1.24
LMO3-213ENST00000536172 TRBV6-8A0A0A6YYG3 113 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 I3L3M4 83 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 LECT2O14960 151 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 HLA-DQA1P01909 254 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 APCSP02743 223 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 MT-ND6P03923 174 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 AMTP48728 403 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 BAALCQ8WXS3 180 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 TMEM18Q96B42 140 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 SMCO4Q9NRQ5 59 aa7.29□□□□□ -1.24
LMO3-213ENST00000536172 NCR2O95944 276 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 Q8N3U1 123 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 LAMTOR2Q9Y2Q5 125 aa7.28□□□□□ -1.24
LMO3-213ENST00000536172 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms