RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CCL20P78556 96 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 BIN3Q9NQY0 253 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 TNXBP22105 4242 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 COLCA2A8K830 154 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 C1orf196B1AJZ1 125 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 PPP1R2P9O14990 202 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 UBE2G2P60604 165 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 RBX1P62877 108 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 TMEM241Q24JQ0 296 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 ANAPC16Q96DE5 110 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 IMMP2LQ96T52 175 aa7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
CLSTN3-206ENST00000535668 LRP2P98164 4655 aa7.16□□□□□ -1.26
CLSTN3-206ENST00000535668 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
CLSTN3-206ENST00000535668 ANGP03950 147 aaKnown RBP7.16□□□□□ -1.26
CLSTN3-206ENST00000535668 TRBV25-1A0A075B6N4 114 aa7.15□□□□□ -1.26
CLSTN3-206ENST00000535668 ZNF727A8MUV8 499 aa7.15□□□□□ -1.26
CLSTN3-206ENST00000535668 PANO1I0J062 215 aa7.15□□□□□ -1.26
CLSTN3-206ENST00000535668 M0QY20 66 aa7.15□□□□□ -1.26
CLSTN3-206ENST00000535668 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
CLSTN3-206ENST00000535668 TRBV24-1A0A075B6N3 115 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 RAB5AP20339 215 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 S100PP25815 95 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 AKR1C3P42330 323 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 SMIM7Q9BQ49 75 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 PLAC8Q9NZF1 115 aa7.14□□□□□ -1.27
CLSTN3-206ENST00000535668 TMSB15BA0A087X1C1 80 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 REG3AQ06141 175 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 ZNF56Q15929 161 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 CST9LP1Q5W188 147 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 BAGE2Q86Y30 109 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 LINC00269Q8N2A0 174 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 C20orf203Q8NBC4 194 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 AP1S3Q96PC3 154 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 DERL1Q9BUN8 251 aa7.13□□□□□ -1.27
CLSTN3-206ENST00000535668 IGHV1-24A0A0C4DH33 117 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 H7C1H1 209 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 PAGE4O60829 102 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 SLPIP03973 132 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 S100A6P06703 90 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 SPANXN1Q5VSR9 72 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 YPEL4Q96NS1 127 aa7.12□□□□□ -1.27
CLSTN3-206ENST00000535668 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.11□□□□□ -1.27
CLSTN3-206ENST00000535668 HLA-DQA1P01909 254 aa7.11□□□□□ -1.27
CLSTN3-206ENST00000535668 S100A8P05109 93 aa7.11□□□□□ -1.27
CLSTN3-206ENST00000535668 COX19Q49B96 90 aa7.11□□□□□ -1.27
CLSTN3-206ENST00000535668 CNFNQ9BYD5 112 aa7.11□□□□□ -1.27
CLSTN3-206ENST00000535668 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
CLSTN3-206ENST00000535668 A0A1B0GV50 99 aa7.1□□□□□ -1.27
CLSTN3-206ENST00000535668 C19orf71A6NCJ1 209 aa7.1□□□□□ -1.27
CLSTN3-206ENST00000535668 F2Z2F3 143 aa7.1□□□□□ -1.27
CLSTN3-206ENST00000535668 CACNG7P62955 275 aa7.1□□□□□ -1.27
CLSTN3-206ENST00000535668 A0A087WYN8 130 aa7.09□□□□□ -1.27
CLSTN3-206ENST00000535668 SCO2A0A1W2PP80 73 aa7.09□□□□□ -1.27
CLSTN3-206ENST00000535668 SMIM17P0DL12 118 aa7.09□□□□□ -1.27
CLSTN3-206ENST00000535668 RPS20P60866 119 aaKnown RBP7.09□□□□□ -1.27
CLSTN3-206ENST00000535668 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
CLSTN3-206ENST00000535668 RNF213Q63HN8 5207 aa7.09□□□□□ -1.28
CLSTN3-206ENST00000535668 IGLV10-54A0A075B6I4 117 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 F5H697 171 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 RPL35P42766 123 aaKnown RBP7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 CEBPGP53567 150 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 RPL23P62829 140 aaKnown RBP7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 GAGE6Q13070 117 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
CLSTN3-206ENST00000535668 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 hDV102S1A0JD36 115 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 H7C423 109 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 ADIRFQ15847 76 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 FER1L6-AS1Q8NA97 138 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 AP5S1Q9NUS5 200 aa7.07□□□□□ -1.28
CLSTN3-206ENST00000535668 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
CLSTN3-206ENST00000535668 RPS10P46783 165 aaKnown RBP7.06□□□□□ -1.28
CLSTN3-206ENST00000535668 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
CLSTN3-206ENST00000535668 XKRY2A2RUG3 117 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 NCR2O95944 276 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 TRGC1P0CF51 173 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 CTRLP40313 264 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 DPH3P1Q9H4G8 78 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
CLSTN3-206ENST00000535668 SMIM6P0DI80 62 aa7.04□□□□□ -1.28
CLSTN3-206ENST00000535668 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
CLSTN3-206ENST00000535668 S100A12P80511 92 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms