RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
MCF2L-232ENST00000535094 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
MCF2L-232ENST00000535094 C19orf84I3L1E1 186 aa11.83□□□□□ -0.52
MCF2L-232ENST00000535094 M0QY20 66 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 TRIAP1O43715 76 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 ELANEP08246 267 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE5Q13069 117 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE6Q13070 117 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
MCF2L-232ENST00000535094 ACANP16112 2415 aa11.82□□□□□ -0.52
MCF2L-232ENST00000535094 LINC01619G3V211 115 aa11.81□□□□□ -0.52
MCF2L-232ENST00000535094 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
MCF2L-232ENST00000535094 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
MCF2L-232ENST00000535094 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
MCF2L-232ENST00000535094 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 IGHV4OR15-8A0A075B7B6 117 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 A0A087WW49 117 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 IFITM1P13164 125 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 CRLF1O75462 422 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 IGHG2P01859 326 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 LINC00315P59091 139 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 MED14OSP0DP75 135 aa11.8□□□□□ -0.52
MCF2L-232ENST00000535094 SOCS3O14543 225 aa11.79□□□□□ -0.52
MCF2L-232ENST00000535094 RHOHQ15669 191 aa11.79□□□□□ -0.52
MCF2L-232ENST00000535094 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
MCF2L-232ENST00000535094 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
MCF2L-232ENST00000535094 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
MCF2L-232ENST00000535094 RS1O15537 224 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 A0A0J9YX75 114 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 KLLNB2CW77 178 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE7O76087 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 GAGE4Q13068 117 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 XCL2Q9UBD3 114 aa11.78□□□□□ -0.52
MCF2L-232ENST00000535094 MSMBP08118 114 aa11.77□□□□□ -0.52
MCF2L-232ENST00000535094 Q9UF83 564 aa11.77□□□□□ -0.52
MCF2L-232ENST00000535094 TMEM263Q8WUH6 116 aaKnown RBP11.77□□□□□ -0.53
MCF2L-232ENST00000535094 NBL1P41271 181 aa11.77□□□□□ -0.53
MCF2L-232ENST00000535094 SMIM20Q8N5G0 67 aa11.77□□□□□ -0.53
MCF2L-232ENST00000535094 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
MCF2L-232ENST00000535094 LGALS9O00182 355 aa11.76□□□□□ -0.53
MCF2L-232ENST00000535094 DEFB112Q30KQ8 113 aa11.76□□□□□ -0.53
MCF2L-232ENST00000535094 DCANP1Q8TF63 244 aa11.76□□□□□ -0.53
MCF2L-232ENST00000535094 ITPR1Q14643 2758 aa11.76□□□□□ -0.53
MCF2L-232ENST00000535094 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
MCF2L-232ENST00000535094 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 CCDC179H3BU77 68 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 Q9H8V8 135 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
MCF2L-232ENST00000535094 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-232ENST00000535094 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
MCF2L-232ENST00000535094 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
MCF2L-232ENST00000535094 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
MCF2L-232ENST00000535094 SLURP1P55000 103 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 FLNCQ14315 2725 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 CFHR3Q02985 330 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 C19orf54Q5BKX5 351 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
MCF2L-232ENST00000535094 A6NDX4 124 aa11.72□□□□□ -0.53
MCF2L-232ENST00000535094 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
MCF2L-232ENST00000535094 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
MCF2L-232ENST00000535094 AVPP01185 164 aa11.72□□□□□ -0.53
MCF2L-232ENST00000535094 B4DSR2 109 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 NSUN5P1Q3KNT7 163 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 CRYBG3Q68DQ2 2970 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 LINC00467Q9BRT7 94 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.53
MCF2L-232ENST00000535094 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.54
MCF2L-232ENST00000535094 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
MCF2L-232ENST00000535094 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
MCF2L-232ENST00000535094 UBE2L6O14933 153 aa11.7□□□□□ -0.54
MCF2L-232ENST00000535094 POM121L12Q8N7R1 296 aa11.7□□□□□ -0.54
MCF2L-232ENST00000535094 C9orf85Q96MD7 179 aa11.7□□□□□ -0.54
MCF2L-232ENST00000535094 H3BUA1 57 aa11.69□□□□□ -0.54
MCF2L-232ENST00000535094 K7EQG2 157 aa11.69□□□□□ -0.54
MCF2L-232ENST00000535094 NDUFA7O95182 113 aa11.69□□□□□ -0.54
MCF2L-232ENST00000535094 H7C423 109 aa11.69□□□□□ -0.54
MCF2L-232ENST00000535094 RNASE1P07998 156 aaKnown RBP11.69□□□□□ -0.54
MCF2L-232ENST00000535094 GAGE2AQ6NT46 116 aa11.69□□□□□ -0.54
MCF2L-232ENST00000535094 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
MCF2L-232ENST00000535094 AMELXQ99217 191 aa11.68□□□□□ -0.54
MCF2L-232ENST00000535094 K7EMT4 169 aa11.67□□□□□ -0.54
MCF2L-232ENST00000535094 DNAL4O96015 105 aa11.67□□□□□ -0.54
MCF2L-232ENST00000535094 MIAQ16674 131 aa11.67□□□□□ -0.54
MCF2L-232ENST00000535094 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
MCF2L-232ENST00000535094 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-232ENST00000535094 C10orf105Q8TEF2 133 aa11.67□□□□□ -0.54
MCF2L-232ENST00000535094 RPL32P62910 135 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms