RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 C11orf52Q96A22 123 aa8.74□□□□□ -1.01
CCDC84-208ENST00000534656 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
CCDC84-208ENST00000534656 F2Z2F3 143 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 SMLR1H3BR10 107 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
CCDC84-208ENST00000534656 TRGC1P0CF51 173 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 AMTP48728 403 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 COTL1Q14019 142 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 PRSS3P2Q8NHM4 247 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 LRP2P98164 4655 aa8.73□□□□□ -1.01
CCDC84-208ENST00000534656 XKRY2A2RUG3 117 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 NTF3P20783 257 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 MAJINQ3KP22 176 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 GTSF1Q8WW33 167 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 MANBALQ9NQG1 85 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 BATF3Q9NR55 127 aa8.72□□□□□ -1.01
CCDC84-208ENST00000534656 CCL20P78556 96 aa8.71□□□□□ -1.02
CCDC84-208ENST00000534656 PRR3P79522 188 aaKnown RBP8.71□□□□□ -1.02
CCDC84-208ENST00000534656 HIGD2BQ4VC39 106 aa8.71□□□□□ -1.02
CCDC84-208ENST00000534656 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
CCDC84-208ENST00000534656 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 IGKV3OR2-268A0A0C4DH90 116 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 RAB19A4D1S5 217 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 IFNA1P01562 189 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 STPG4Q8N801 248 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 SMIM12Q96EX1 92 aa8.7□□□□□ -1.02
CCDC84-208ENST00000534656 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 HMSDA8MTL9 139 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 BCL2L11O43521 198 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 GNG4P50150 75 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 C9orf62Q8N4C0 152 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
CCDC84-208ENST00000534656 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
CCDC84-208ENST00000534656 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
CCDC84-208ENST00000534656 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
CCDC84-208ENST00000534656 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
CCDC84-208ENST00000534656 EIF5AP63241 154 aaKnown RBP8.68□□□□□ -1.02
CCDC84-208ENST00000534656 ODF1Q14990 250 aa8.68□□□□□ -1.02
CCDC84-208ENST00000534656 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
CCDC84-208ENST00000534656 A0A096LNI7 61 aa8.67□□□□□ -1.02
CCDC84-208ENST00000534656 CTRLP40313 264 aa8.67□□□□□ -1.02
CCDC84-208ENST00000534656 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
CCDC84-208ENST00000534656 AMMECR1LQ6DCA0 310 aa8.67□□□□□ -1.02
CCDC84-208ENST00000534656 BIN3Q9NQY0 253 aa8.67□□□□□ -1.02
CCDC84-208ENST00000534656 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 H7C423 109 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 NCR2O95944 276 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 FOXI1Q12951 378 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 TWIST1Q15672 202 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 RGS21Q2M5E4 152 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
CCDC84-208ENST00000534656 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 Q6ZNX1 250 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
CCDC84-208ENST00000534656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
CCDC84-208ENST00000534656 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.02
CCDC84-208ENST00000534656 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
CCDC84-208ENST00000534656 PDE6DO43924 150 aa8.65□□□□□ -1.02
CCDC84-208ENST00000534656 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
CCDC84-208ENST00000534656 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
CCDC84-208ENST00000534656 NUDT10Q8NFP7 164 aa8.65□□□□□ -1.02
CCDC84-208ENST00000534656 NUDT11Q96G61 164 aa8.65□□□□□ -1.02
CCDC84-208ENST00000534656 TEX46H3BTG2 121 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 APCSP02743 223 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 FGF6P10767 208 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 OR5A1Q8NGJ0 315 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CCDC84-208ENST00000534656 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
CCDC84-208ENST00000534656 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC84-208ENST00000534656 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CCDC84-208ENST00000534656 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
CCDC84-208ENST00000534656 XCL1P47992 114 aa8.62□□□□□ -1.03
CCDC84-208ENST00000534656 Q6ZRP5 223 aa8.62□□□□□ -1.03
CCDC84-208ENST00000534656 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
CCDC84-208ENST00000534656 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 CCL25O15444 150 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
CCDC84-208ENST00000534656 TEX261Q6UWH6 196 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
CCDC84-208ENST00000534656 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
CCDC84-208ENST00000534656 FAM231BA6NCW3 169 aa8.6□□□□□ -1.03
CCDC84-208ENST00000534656 EIF5AL1Q6IS14 154 aaKnown RBP8.6□□□□□ -1.03
CCDC84-208ENST00000534656 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
CCDC84-208ENST00000534656 BTF3L4Q96K17 158 aa8.6□□□□□ -1.03
CCDC84-208ENST00000534656 I3L3M4 83 aa8.59□□□□□ -1.03
CCDC84-208ENST00000534656 K7EN84 100 aa8.59□□□□□ -1.03
CCDC84-208ENST00000534656 BCL2P10415 239 aa8.59□□□□□ -1.03
CCDC84-208ENST00000534656 PMCHP20382 165 aa8.59□□□□□ -1.03
CCDC84-208ENST00000534656 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
CCDC84-208ENST00000534656 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
CCDC84-208ENST00000534656 ESDP10768 282 aa8.58□□□□□ -1.04
CCDC84-208ENST00000534656 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
CCDC84-208ENST00000534656 SS18Q15532 418 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms