RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PRSS1P07477 247 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 TRGC1P0CF51 173 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 RAB4AP20338 218 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
USH1C-210ENST00000534556 CT83Q5H943 113 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 LINC00269Q8N2A0 174 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 TSKUQ8WUA8 353 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 CHCHD5Q9BSY4 110 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
USH1C-210ENST00000534556 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
USH1C-210ENST00000534556 IGHV1-24A0A0C4DH33 117 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 A0A1B0GUT8 65 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 SMIM27A0A1W2PRY6 76 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
USH1C-210ENST00000534556 XKRY2A2RUG3 117 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 EREGO14944 169 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 NCR2O95944 276 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 TSHBP01222 138 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 ESDP10768 282 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
USH1C-210ENST00000534556 TMEM241Q24JQ0 296 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 AMN1Q8IY45 258 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 NRACQ8N912 160 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 FAM104AQ969W3 186 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 TM2D2Q9BX73 214 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 BIN3Q9NQY0 253 aa3.28□□□□□ -1.88
USH1C-210ENST00000534556 TRBV25-1A0A075B6N4 114 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 TRBV6-5A0A0K0K1A5 114 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 A0A1B0GUV1 79 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 A0A1B0GXF2 115 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 SDHAF1A6NFY7 115 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 USP17L23D6RBM5 183 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 REG3AQ06141 175 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 ADIRFQ15847 76 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 MRPL51Q4U2R6 128 aaKnown RBP3.27□□□□□ -1.89
USH1C-210ENST00000534556 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 Q5VSD8 79 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 TMEM70Q9BUB7 260 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 TMEM191AQ9H0A3 160 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 TMEM242Q9NWH2 141 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 NAT8Q9UHE5 227 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 URGCP-MRPS24S4R325 110 aa3.27□□□□□ -1.89
USH1C-210ENST00000534556 H7C1H1 209 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 HLA-DQA1P01909 254 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 ADCYAP1P18509 176 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 AMTP48728 403 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 Q0VG73 95 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 COTL1Q14019 142 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 PEA15Q15121 130 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 ELOBQ15370 118 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 MIAQ16674 131 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 TMEM97Q5BJF2 176 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 FAM104BQ5XKR9 115 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 FRZBQ92765 325 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 C1orf43Q9BWL3 253 aa3.26□□□□□ -1.89
USH1C-210ENST00000534556 TNXBP22105 4242 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 TRBV27A0A0K0K1C4 114 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 EPM2AB3EWF7 344 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 FGF6P10767 208 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 MRPL54Q6P161 138 aaKnown RBP3.25□□□□□ -1.89
USH1C-210ENST00000534556 SDIM1Q6ZPB5 146 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 CIRBP-AS1Q8TBR5 109 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 SMDT1Q9H4I9 107 aa3.25□□□□□ -1.89
USH1C-210ENST00000534556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.25□□□□□ -1.89
USH1C-210ENST00000534556 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 GAGE12HA6NDE8 117 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 I3L3M4 83 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 NPYP01303 97 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 CRPP02741 224 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 APCSP02743 223 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 CHTF8P0CG12 524 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 PMCHP20382 165 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 CAMPP49913 170 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 HNRNPA3P51991 378 aaKnown RBP3.24□□□□□ -1.89
USH1C-210ENST00000534556 FOXI1Q12951 378 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 RIGQ13278 110 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
USH1C-210ENST00000534556 CLLU1Q5K131 121 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 KCNIP4Q6PIL6 250 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 C9orf163Q8N9P6 203 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 RMI2Q96E14 147 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 LINC00526Q96FQ7 95 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 MRAP2Q96G30 205 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 CHAC1Q9BUX1 264 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 ST20Q9HBF5 79 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 NAT8BQ9UHF3 227 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 COX11Q9Y6N1 276 aa3.24□□□□□ -1.89
USH1C-210ENST00000534556 TRBV24-1A0A075B6N3 115 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 TRAV8-4A0A0B4J246 113 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 D6R8Y8 96 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 TNFRSF6BO95407 300 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 INAFM2P0DMQ5 153 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 PKIAP61925 76 aa3.23□□□□□ -1.89
USH1C-210ENST00000534556 SUMO2P61956 95 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms