RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 COL12A1Q99715 3063 aa14.21□□□□□ -0.13
SMPD1-210ENST00000534405 I3L3M4 83 aa14.21□□□□□ -0.14
SMPD1-210ENST00000534405 LY6EQ16553 131 aa14.21□□□□□ -0.14
SMPD1-210ENST00000534405 PEMTQ9UBM1 199 aa14.21□□□□□ -0.14
SMPD1-210ENST00000534405 TRAV8-3A0A0A6YYJ7 113 aa14.2□□□□□ -0.14
SMPD1-210ENST00000534405 HRCT1Q6UXD1 115 aa14.2□□□□□ -0.14
SMPD1-210ENST00000534405 DUX5Q96PT3 197 aa14.19□□□□□ -0.14
SMPD1-210ENST00000534405 SPG11Q96JI7 2443 aa14.18□□□□□ -0.14
SMPD1-210ENST00000534405 IGHV3-11P01762 117 aa14.18□□□□□ -0.14
SMPD1-210ENST00000534405 POLR2KP53803 58 aaKnown RBP14.18□□□□□ -0.14
SMPD1-210ENST00000534405 C9orf139Q6ZV77 190 aa14.17□□□□□ -0.14
SMPD1-210ENST00000534405 TIMM21Q9BVV7 248 aa14.17□□□□□ -0.14
SMPD1-210ENST00000534405 IGHV4OR15-8A0A075B7B6 117 aa14.17□□□□□ -0.14
SMPD1-210ENST00000534405 A0A087WW49 117 aa14.17□□□□□ -0.14
SMPD1-210ENST00000534405 SOCS3O14543 225 aa14.16□□□□□ -0.14
SMPD1-210ENST00000534405 ZFAND2AQ8N6M9 145 aa14.16□□□□□ -0.14
SMPD1-210ENST00000534405 H3BUX3 64 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 BLCAPP62952 87 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 PIMREGQ9BSJ6 248 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 PHLDA3Q9Y5J5 127 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 MAP1AP78559 2803 aaPredicted RBP14.15□□□□□ -0.14
SMPD1-210ENST00000534405 IGHV3-64A0A075B6Q5 118 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 NDUFA4O00483 81 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 VCYO14598 125 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 MED14OSP0DP75 135 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 C10orf105Q8TEF2 133 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 UPK3BQ9BT76 320 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 PKD1L2Q7Z442 2459 aa14.15□□□□□ -0.14
SMPD1-210ENST00000534405 Q6ZSV7 163 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 IGHG2P01859 326 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 PRSS2P07478 247 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 RHOHQ15669 191 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 TMEM61Q8N0U2 210 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 FAM19A4Q96LR4 140 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 DSCR8Q96T75 97 aa14.14□□□□□ -0.15
SMPD1-210ENST00000534405 F6UB75 175 aa14.13□□□□□ -0.15
SMPD1-210ENST00000534405 S100A4P26447 101 aaKnown RBP14.13□□□□□ -0.15
SMPD1-210ENST00000534405 CCL19Q99731 98 aa14.13□□□□□ -0.15
SMPD1-210ENST00000534405 IGHV4-30-2A0A087WSY4 118 aa14.13□□□□□ -0.15
SMPD1-210ENST00000534405 A6NDX4 124 aa14.13□□□□□ -0.15
SMPD1-210ENST00000534405 RPL18AQ02543 176 aaKnown RBP14.13□□□□□ -0.15
SMPD1-210ENST00000534405 LENEPQ9Y5L5 61 aa14.13□□□□□ -0.15
SMPD1-210ENST00000534405 IGKV3-7A0A075B6H7 116 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 MIAQ16674 131 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 ADAMTSL4-AS1Q5T5F5 129 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 DAND5Q8N907 189 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 LINC00315P59091 139 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 LINC00477Q96M19 166 aa14.12□□□□□ -0.15
SMPD1-210ENST00000534405 ZNF580Q9UK33 172 aa14.11□□□□□ -0.15
SMPD1-210ENST00000534405 KIF25-AS1Q9Y6Z4 181 aa14.11□□□□□ -0.15
SMPD1-210ENST00000534405 CFAP46Q8IYW2 2715 aa14.11□□□□□ -0.15
SMPD1-210ENST00000534405 EDN2P20800 178 aa14.11□□□□□ -0.15
SMPD1-210ENST00000534405 SERP2Q8N6R1 65 aa14.11□□□□□ -0.15
SMPD1-210ENST00000534405 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMPD1-210ENST00000534405 RPL11P62913 178 aaKnown RBP14.1□□□□□ -0.15
SMPD1-210ENST00000534405 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 IGHV3-30-3P0DP02 117 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 DEFB104AQ8WTQ1 72 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 JPT2Q9H910 190 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 PYGO1Q9Y3Y4 419 aa14.1□□□□□ -0.15
SMPD1-210ENST00000534405 AVPP01185 164 aa14.09□□□□□ -0.15
SMPD1-210ENST00000534405 TRAV13-1A0A0B4J241 112 aa14.09□□□□□ -0.15
SMPD1-210ENST00000534405 TRBV27A0A0K0K1C4 114 aa14.09□□□□□ -0.15
SMPD1-210ENST00000534405 DAZ2Q13117 558 aaKnown RBP14.09□□□□□ -0.15
SMPD1-210ENST00000534405 DAZ4Q86SG3 579 aaKnown RBP14.09□□□□□ -0.15
SMPD1-210ENST00000534405 DAZ1Q9NQZ3 744 aaKnown RBP14.09□□□□□ -0.15
SMPD1-210ENST00000534405 DAZ3Q9NR90 486 aaKnown RBP14.09□□□□□ -0.15
SMPD1-210ENST00000534405 TRAV21A0A0B4J279 112 aa14.08□□□□□ -0.16
SMPD1-210ENST00000534405 ADARB2-AS1A8MUL3 147 aa14.08□□□□□ -0.16
SMPD1-210ENST00000534405 NXPH4O95158 308 aa14.08□□□□□ -0.16
SMPD1-210ENST00000534405 OPRPNQ99935 248 aaPredicted RBP14.08□□□□□ -0.16
SMPD1-210ENST00000534405 RHPN1-AS1Q9BWJ2 59 aa14.08□□□□□ -0.16
SMPD1-210ENST00000534405 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.16
SMPD1-210ENST00000534405 H3BUA1 57 aa14.07□□□□□ -0.16
SMPD1-210ENST00000534405 F8WDY8 70 aa14.07□□□□□ -0.16
SMPD1-210ENST00000534405 RNASE4P34096 147 aaKnown RBP14.07□□□□□ -0.16
SMPD1-210ENST00000534405 A0A0J9YXV3 536 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 GNRH2O43555 120 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 IGLV1-40P01703 118 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 MSMBP08118 114 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 SUMO4Q6EEV6 95 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 MALP21145 153 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 CSMD2Q7Z408 3487 aa14.06□□□□□ -0.16
SMPD1-210ENST00000534405 FLNCQ14315 2725 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 RNASE3P12724 160 aaKnown RBP14.05□□□□□ -0.16
SMPD1-210ENST00000534405 TIRAPP58753 221 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 NSUN5P1Q3KNT7 163 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 TRBV6-5A0A0K0K1A5 114 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 COX7A2LO14548 114 aa14.05□□□□□ -0.16
SMPD1-210ENST00000534405 CFHR3Q02985 330 aa14.04□□□□□ -0.16
SMPD1-210ENST00000534405 PRO0628Q9UI54 55 aa14.04□□□□□ -0.16
SMPD1-210ENST00000534405 USP9XQ93008 2570 aaPredicted RBP14.04□□□□□ -0.16
SMPD1-210ENST00000534405 APRG1Q8IVJ8 170 aa14.04□□□□□ -0.16
SMPD1-210ENST00000534405 MUC4Q99102 2169 aa14.04□□□□□ -0.16
SMPD1-210ENST00000534405 INAFM2P0DMQ5 153 aa14.03□□□□□ -0.16
SMPD1-210ENST00000534405 BEAN1Q3B7T3 259 aa14.03□□□□□ -0.16
SMPD1-210ENST00000534405 C22orf24Q9Y442 160 aa14.03□□□□□ -0.16
SMPD1-210ENST00000534405 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms