RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SULT1A2P50226 295 aa10.72□□□□□ -0.69
CAPRIN1-216ENST00000534042 CCL20P78556 96 aa10.72□□□□□ -0.69
CAPRIN1-216ENST00000534042 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
CAPRIN1-216ENST00000534042 RAB19A4D1S5 217 aa10.71□□□□□ -0.69
CAPRIN1-216ENST00000534042 AMTP48728 403 aa10.71□□□□□ -0.69
CAPRIN1-216ENST00000534042 GNG4P50150 75 aa10.71□□□□□ -0.69
CAPRIN1-216ENST00000534042 COTL1Q14019 142 aa10.71□□□□□ -0.69
CAPRIN1-216ENST00000534042 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
CAPRIN1-216ENST00000534042 TRAV1-1A0A0B4J248 108 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 IFNA1P01562 189 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 NTF3P20783 257 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 SPACA4Q8TDM5 124 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
CAPRIN1-216ENST00000534042 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
CAPRIN1-216ENST00000534042 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
CAPRIN1-216ENST00000534042 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
CAPRIN1-216ENST00000534042 C7orf33Q8WU49 177 aa10.68□□□□□ -0.7
CAPRIN1-216ENST00000534042 BIN3Q9NQY0 253 aa10.68□□□□□ -0.7
CAPRIN1-216ENST00000534042 PLAC8Q9NZF1 115 aa10.68□□□□□ -0.7
CAPRIN1-216ENST00000534042 C15orf56Q8N910 161 aa10.67□□□□□ -0.7
CAPRIN1-216ENST00000534042 MED9Q9NWA0 146 aa10.67□□□□□ -0.7
CAPRIN1-216ENST00000534042 UBR4Q5T4S7 5183 aa10.67□□□□□ -0.7
CAPRIN1-216ENST00000534042 PHOX2AO14813 284 aa10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 PDE6DO43924 150 aa10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 MEF2BQ02080 365 aaPredicted RBP10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 COX6A2Q02221 97 aa10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 C9orf62Q8N4C0 152 aa10.66□□□□□ -0.7
CAPRIN1-216ENST00000534042 CTRLP40313 264 aa10.65□□□□□ -0.7
CAPRIN1-216ENST00000534042 TWIST1Q15672 202 aa10.65□□□□□ -0.7
CAPRIN1-216ENST00000534042 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
CAPRIN1-216ENST00000534042 AMMECR1LQ6DCA0 310 aa10.65□□□□□ -0.7
CAPRIN1-216ENST00000534042 TRBV20OR9-2A0A075B6H5 130 aa10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 MAJINQ3KP22 176 aa10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 EIF5AL1Q6IS14 154 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 CHCHD10Q8WYQ3 142 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
CAPRIN1-216ENST00000534042 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 RNASEKQ6P5S7 137 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
CAPRIN1-216ENST00000534042 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
CAPRIN1-216ENST00000534042 NCR2O95944 276 aa10.62□□□□□ -0.71
CAPRIN1-216ENST00000534042 BCL2P10415 239 aa10.61□□□□□ -0.71
CAPRIN1-216ENST00000534042 Q6ZNX1 250 aa10.61□□□□□ -0.71
CAPRIN1-216ENST00000534042 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-216ENST00000534042 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 H7C423 109 aa10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 APCSP02743 223 aa10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 SMIM15Q7Z3B0 74 aa10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 STPG4Q8N801 248 aa10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-216ENST00000534042 FGF6P10767 208 aa10.59□□□□□ -0.71
CAPRIN1-216ENST00000534042 PRR3P79522 188 aaKnown RBP10.59□□□□□ -0.71
CAPRIN1-216ENST00000534042 LYPD6BQ8NI32 183 aa10.59□□□□□ -0.71
CAPRIN1-216ENST00000534042 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
CAPRIN1-216ENST00000534042 TEX261Q6UWH6 196 aa10.58□□□□□ -0.72
CAPRIN1-216ENST00000534042 LINC01600Q96MT4 127 aa10.58□□□□□ -0.72
CAPRIN1-216ENST00000534042 A0A096LNI7 61 aa10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 ZNF25P17030 456 aaPredicted RBP10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 FOXI1Q12951 378 aa10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
CAPRIN1-216ENST00000534042 K7EN84 100 aa10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 PMCHP20382 165 aa10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 BTF3L4Q96K17 158 aa10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 LINC00474Q9P2X8 69 aa10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
CAPRIN1-216ENST00000534042 XCL1P47992 114 aa10.55□□□□□ -0.72
CAPRIN1-216ENST00000534042 TMEM101Q96IK0 257 aa10.55□□□□□ -0.72
CAPRIN1-216ENST00000534042 IGHV1-58A0A0C4DH39 117 aa10.54□□□□□ -0.72
CAPRIN1-216ENST00000534042 I3L3M4 83 aa10.54□□□□□ -0.72
CAPRIN1-216ENST00000534042 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
CAPRIN1-216ENST00000534042 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
CAPRIN1-216ENST00000534042 CCL25O15444 150 aa10.53□□□□□ -0.72
CAPRIN1-216ENST00000534042 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
CAPRIN1-216ENST00000534042 CARD19Q96LW7 228 aa10.53□□□□□ -0.72
CAPRIN1-216ENST00000534042 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
CAPRIN1-216ENST00000534042 GATCO43716 136 aaKnown RBP10.52□□□□□ -0.73
CAPRIN1-216ENST00000534042 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
CAPRIN1-216ENST00000534042 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
CAPRIN1-216ENST00000534042 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 A8MWL6 223 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 ESDP10768 282 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 SS18Q15532 418 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
CAPRIN1-216ENST00000534042 ZNF561-AS1K7EIQ3 104 aa10.5□□□□□ -0.73
CAPRIN1-216ENST00000534042 ODF1Q14990 250 aa10.5□□□□□ -0.73
CAPRIN1-216ENST00000534042 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms