RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SMIM2Q9BVW6 85 aa10.64□□□□□ -0.71
CTTN-215ENST00000533931 TRAPPC1Q9Y5R8 145 aa10.64□□□□□ -0.71
CTTN-215ENST00000533931 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
CTTN-215ENST00000533931 H7C423 109 aa10.63□□□□□ -0.71
CTTN-215ENST00000533931 K7EMI3 77 aa10.63□□□□□ -0.71
CTTN-215ENST00000533931 TMEM243Q9BU79 118 aa10.63□□□□□ -0.71
CTTN-215ENST00000533931 MAP1LC3AQ9H492 121 aa10.63□□□□□ -0.71
CTTN-215ENST00000533931 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 TSHBP01222 138 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 AMTP48728 403 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 FABP9Q0Z7S8 132 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 NIT1Q86X76 327 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
CTTN-215ENST00000533931 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
CTTN-215ENST00000533931 COLCA2A8K830 154 aa10.61□□□□□ -0.71
CTTN-215ENST00000533931 Q6ZR54 194 aa10.61□□□□□ -0.71
CTTN-215ENST00000533931 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
CTTN-215ENST00000533931 NXT2Q9NPJ8 142 aaKnown RBP10.61□□□□□ -0.71
CTTN-215ENST00000533931 KMT2CQ8NEZ4 4911 aaKnown RBP10.61□□□□□ -0.71
CTTN-215ENST00000533931 ESDP10768 282 aa10.6□□□□□ -0.71
CTTN-215ENST00000533931 FCER1GP30273 86 aa10.6□□□□□ -0.71
CTTN-215ENST00000533931 IGLV2-18A0A075B6J9 118 aa10.59□□□□□ -0.71
CTTN-215ENST00000533931 A0A087WX48 190 aa10.59□□□□□ -0.71
CTTN-215ENST00000533931 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
CTTN-215ENST00000533931 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
CTTN-215ENST00000533931 Q8N8P6 123 aa10.59□□□□□ -0.71
CTTN-215ENST00000533931 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
CTTN-215ENST00000533931 RAB5AP20339 215 aa10.58□□□□□ -0.72
CTTN-215ENST00000533931 LAGE3Q14657 143 aa10.58□□□□□ -0.72
CTTN-215ENST00000533931 UBE2L6O14933 153 aa10.57□□□□□ -0.72
CTTN-215ENST00000533931 ZNF25P17030 456 aaPredicted RBP10.57□□□□□ -0.72
CTTN-215ENST00000533931 SCO1O75880 301 aa10.56□□□□□ -0.72
CTTN-215ENST00000533931 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
CTTN-215ENST00000533931 TMEM18Q96B42 140 aa10.56□□□□□ -0.72
CTTN-215ENST00000533931 SACSQ9NZJ4 4579 aa10.56□□□□□ -0.72
CTTN-215ENST00000533931 DNAH6Q9C0G6 4158 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 IBA57-AS1B1ANH7 110 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 TMEM262E9PQX1 116 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 G0S2P27469 103 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 RBX1P62877 108 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 GAGE6Q13070 117 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 ORMDL2Q53FV1 153 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
CTTN-215ENST00000533931 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
CTTN-215ENST00000533931 MPV17L2Q567V2 206 aa10.54□□□□□ -0.72
CTTN-215ENST00000533931 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
CTTN-215ENST00000533931 TIMM21Q9BVV7 248 aa10.54□□□□□ -0.72
CTTN-215ENST00000533931 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
CTTN-215ENST00000533931 CSDC2Q9Y534 153 aaKnown RBP10.54□□□□□ -0.72
CTTN-215ENST00000533931 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 TRGC2P03986 189 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 FGF6P10767 208 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
CTTN-215ENST00000533931 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
CTTN-215ENST00000533931 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
CTTN-215ENST00000533931 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
CTTN-215ENST00000533931 RAB5BP61020 215 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 PRR34Q9NV39 138 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 RYR2Q92736 4967 aa10.52□□□□□ -0.73
CTTN-215ENST00000533931 M0R2N4 97 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 Q0VG73 95 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 Q8N3U1 123 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 Q8N976 141 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
CTTN-215ENST00000533931 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
CTTN-215ENST00000533931 NPSP0C0P6 89 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 UBE2D4Q9Y2X8 147 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
CTTN-215ENST00000533931 MIAQ16674 131 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
CTTN-215ENST00000533931 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 RMI2Q96E14 147 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
CTTN-215ENST00000533931 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
CTTN-215ENST00000533931 CRPP02741 224 aa10.48□□□□□ -0.73
CTTN-215ENST00000533931 LINC00614P0C842 121 aa10.48□□□□□ -0.73
CTTN-215ENST00000533931 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CTTN-215ENST00000533931 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
CTTN-215ENST00000533931 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
CTTN-215ENST00000533931 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
CTTN-215ENST00000533931 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
CTTN-215ENST00000533931 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
CTTN-215ENST00000533931 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms