RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
CAPN1-225ENST00000533704 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
CAPN1-225ENST00000533704 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
CAPN1-225ENST00000533704 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 K7EN84 100 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 HLA-DQA1P01909 254 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 TWIST1Q15672 202 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 RASL11AQ6T310 242 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 SEC11CQ9BY50 192 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 DPH3P1Q9H4G8 78 aa6.87□□□□□ -1.31
CAPN1-225ENST00000533704 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
CAPN1-225ENST00000533704 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
CAPN1-225ENST00000533704 RBX1P62877 108 aa6.86□□□□□ -1.31
CAPN1-225ENST00000533704 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
CAPN1-225ENST00000533704 CTRLP40313 264 aa6.85□□□□□ -1.31
CAPN1-225ENST00000533704 MIAQ16674 131 aa6.85□□□□□ -1.31
CAPN1-225ENST00000533704 CBLN2Q8IUK8 224 aa6.85□□□□□ -1.31
CAPN1-225ENST00000533704 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
CAPN1-225ENST00000533704 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
CAPN1-225ENST00000533704 TMEM250H0YL14 139 aa6.84□□□□□ -1.31
CAPN1-225ENST00000533704 IQCJQ1A5X6 159 aa6.84□□□□□ -1.31
CAPN1-225ENST00000533704 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
CAPN1-225ENST00000533704 PGLYRP4Q96LB8 373 aa6.84□□□□□ -1.31
CAPN1-225ENST00000533704 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
CAPN1-225ENST00000533704 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
CAPN1-225ENST00000533704 FAT1Q14517 4588 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 TRAV26-2A0A0B4J265 109 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 USP17L23D6RBM5 183 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 UBE2L6O14933 153 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 AMTP48728 403 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 COTL1Q14019 142 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 WDR73Q6P4I2 378 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 SMIM15Q7Z3B0 74 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
CAPN1-225ENST00000533704 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
CAPN1-225ENST00000533704 A8MWL6 223 aa6.82□□□□□ -1.32
CAPN1-225ENST00000533704 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
CAPN1-225ENST00000533704 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
CAPN1-225ENST00000533704 REG3AQ06141 175 aa6.82□□□□□ -1.32
CAPN1-225ENST00000533704 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
CAPN1-225ENST00000533704 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
CAPN1-225ENST00000533704 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
CAPN1-225ENST00000533704 ZNF727A8MUV8 499 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 SNRPEP62304 92 aaKnown RBP6.81□□□□□ -1.32
CAPN1-225ENST00000533704 Q6ZSA8 131 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 C20orf203Q8NBC4 194 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 LYPD6BQ8NI32 183 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 BORCS7Q96B45 105 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
CAPN1-225ENST00000533704 CNFNQ9BYD5 112 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 PRR34Q9NV39 138 aa6.81□□□□□ -1.32
CAPN1-225ENST00000533704 IGLV4-60A0A075B6I1 120 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 IGKV3OR2-268A0A0C4DH90 116 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 C5orf52A6NGY3 159 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 DNAH8Q96JB1 4490 aa6.8□□□□□ -1.32
CAPN1-225ENST00000533704 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
CAPN1-225ENST00000533704 PRSS1P07477 247 aa6.79□□□□□ -1.32
CAPN1-225ENST00000533704 AMMECR1LQ6DCA0 310 aa6.79□□□□□ -1.32
CAPN1-225ENST00000533704 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
CAPN1-225ENST00000533704 A0A1B0GUV1 79 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 COLCA2A8K830 154 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 APCSP02743 223 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
CAPN1-225ENST00000533704 S100A2P29034 98 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 FABP9Q0Z7S8 132 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 RHEBQ15382 184 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 CT83Q5H943 113 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 RNASEKQ6P5S7 137 aaKnown RBP6.78□□□□□ -1.32
CAPN1-225ENST00000533704 KRTAP26-1Q6PEX3 210 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 LINC01551Q86U37 167 aa6.78□□□□□ -1.32
CAPN1-225ENST00000533704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
CAPN1-225ENST00000533704 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
CAPN1-225ENST00000533704 SDHAF1A6NFY7 115 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 PMCHP20382 165 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 CIRBP-AS1Q8TBR5 109 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 TSKUQ8WUA8 353 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 OSTCQ9NRP0 149 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
CAPN1-225ENST00000533704 A0A1B0GUT8 65 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 NCR2O95944 276 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 RAB5AP20339 215 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 ADIRFQ15847 76 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 RPS10P5Q9NQ39 176 aa6.76□□□□□ -1.33
CAPN1-225ENST00000533704 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 I3L3M4 83 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
CAPN1-225ENST00000533704 FGF6P10767 208 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms