RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 TAX1BP3O14907 124 aa20.46■□□□□ 0.87
SAMD1-202ENST00000533683 CCL25O15444 150 aa20.46■□□□□ 0.87
SAMD1-202ENST00000533683 SEC11AP67812 179 aa20.46■□□□□ 0.87
SAMD1-202ENST00000533683 DNAJC30Q96LL9 226 aa20.46■□□□□ 0.87
SAMD1-202ENST00000533683 PAPPA-AS1Q5QFB9 102 aa20.45■□□□□ 0.86
SAMD1-202ENST00000533683 TENM1Q9UKZ4 2725 aa20.45■□□□□ 0.86
SAMD1-202ENST00000533683 E9PLD3 99 aa20.44■□□□□ 0.86
SAMD1-202ENST00000533683 OR11H2Q8NH07 326 aa20.44■□□□□ 0.86
SAMD1-202ENST00000533683 SPATA3Q8NHX4 192 aa20.44■□□□□ 0.86
SAMD1-202ENST00000533683 ZNF479Q96JC4 524 aa20.44■□□□□ 0.86
SAMD1-202ENST00000533683 NOP10Q9NPE3 64 aaKnown RBP20.44■□□□□ 0.86
SAMD1-202ENST00000533683 CHAC1Q9BUX1 264 aa20.44■□□□□ 0.86
SAMD1-202ENST00000533683 PLAC8L1A1L4L8 177 aa20.43■□□□□ 0.86
SAMD1-202ENST00000533683 DAZ2Q13117 558 aaKnown RBP20.43■□□□□ 0.86
SAMD1-202ENST00000533683 C16orf74Q96GX8 76 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 IGLV4-3A0A075B6K6 122 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 PTTG1IPP53801 180 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 UBE2V1Q13404 147 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 ZNRF2Q8NHG8 242 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 PRADC1Q9BSG0 188 aa20.42■□□□□ 0.86
SAMD1-202ENST00000533683 CHCHD7Q9BUK0 85 aa20.4■□□□□ 0.86
SAMD1-202ENST00000533683 PYGO1Q9Y3Y4 419 aa20.4■□□□□ 0.86
SAMD1-202ENST00000533683 IGHV3-38A0A0C4DH36 116 aa20.39■□□□□ 0.86
SAMD1-202ENST00000533683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.39■□□□□ 0.86
SAMD1-202ENST00000533683 PHLDA1Q8WV24 401 aaPredicted RBP20.39■□□□□ 0.86
SAMD1-202ENST00000533683 TRAV4A0A0B4J268 109 aa20.39■□□□□ 0.85
SAMD1-202ENST00000533683 FAM104AQ969W3 186 aa20.38■□□□□ 0.85
SAMD1-202ENST00000533683 MYMXA0A1B0GTQ4 84 aa20.38■□□□□ 0.85
SAMD1-202ENST00000533683 INSL3P51460 131 aa20.38■□□□□ 0.85
SAMD1-202ENST00000533683 RRN3P1Q2M238 152 aa20.38■□□□□ 0.85
SAMD1-202ENST00000533683 VCX2Q9H322 139 aa20.38■□□□□ 0.85
SAMD1-202ENST00000533683 SVIPQ8NHG7 77 aa20.37■□□□□ 0.85
SAMD1-202ENST00000533683 A6NDN8 102 aa20.36■□□□□ 0.85
SAMD1-202ENST00000533683 NFE4Q86UQ8 179 aa20.36■□□□□ 0.85
SAMD1-202ENST00000533683 TMEM170BQ5T4T1 132 aa20.36■□□□□ 0.85
SAMD1-202ENST00000533683 CEMP1Q6PRD7 247 aaPredicted RBP20.36■□□□□ 0.85
SAMD1-202ENST00000533683 C9orf66Q5T8R8 295 aa20.35■□□□□ 0.85
SAMD1-202ENST00000533683 CITED1Q99966 193 aa20.35■□□□□ 0.85
SAMD1-202ENST00000533683 GCSHP23434 173 aa20.34■□□□□ 0.85
SAMD1-202ENST00000533683 HERVK_113P61574 105 aa20.34■□□□□ 0.85
SAMD1-202ENST00000533683 TRBV7-3A0A075B6L6 115 aa20.34■□□□□ 0.85
SAMD1-202ENST00000533683 K7EQD1 137 aa20.34■□□□□ 0.85
SAMD1-202ENST00000533683 OVOL2Q9BRP0 275 aa20.34■□□□□ 0.85
SAMD1-202ENST00000533683 ATRQ13535 2644 aa20.33■□□□□ 0.85
SAMD1-202ENST00000533683 AMELXQ99217 191 aa20.33■□□□□ 0.85
SAMD1-202ENST00000533683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.32■□□□□ 0.84
SAMD1-202ENST00000533683 GAGE12BA1L429 117 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 IGKV2-29A2NJV5 120 aaPredicted RBP20.32■□□□□ 0.84
SAMD1-202ENST00000533683 GAGE7O76087 117 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 GAGE12FP0CL80 117 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 GAGE12GP0CL81 117 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 GAGE12IP0CL82 117 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 VAMP3Q15836 100 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 TRBV10-1A0A0K0K1A3 114 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 K7EP13 123 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 FXYD2P54710 66 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 SLC25A29Q8N8R3 303 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 UBE2D4Q9Y2X8 147 aa20.32■□□□□ 0.84
SAMD1-202ENST00000533683 TEP1Q99973 2627 aaKnown RBP20.31■□□□□ 0.84
SAMD1-202ENST00000533683 TRGV2A0A075B6R0 118 aa20.3■□□□□ 0.84
SAMD1-202ENST00000533683 A0A0J9YXV3 536 aa20.3■□□□□ 0.84
SAMD1-202ENST00000533683 ZNF815PA8K554 130 aa20.3■□□□□ 0.84
SAMD1-202ENST00000533683 CRYBA4P53673 196 aa20.3■□□□□ 0.84
SAMD1-202ENST00000533683 SPANXA1Q9NS26 97 aa20.3■□□□□ 0.84
SAMD1-202ENST00000533683 RPL36AP83881 106 aaKnown RBP20.29■□□□□ 0.84
SAMD1-202ENST00000533683 CEND1Q8N111 149 aa20.29■□□□□ 0.84
SAMD1-202ENST00000533683 RPL36ALQ969Q0 106 aaKnown RBP20.29■□□□□ 0.84
SAMD1-202ENST00000533683 TM2D2Q9BX73 214 aa20.29■□□□□ 0.84
SAMD1-202ENST00000533683 H3BRM9 83 aa20.28■□□□□ 0.84
SAMD1-202ENST00000533683 TAL2Q16559 108 aa20.28■□□□□ 0.84
SAMD1-202ENST00000533683 RNASE13Q5GAN3 156 aaKnown RBP20.28■□□□□ 0.84
SAMD1-202ENST00000533683 FLNBO75369 2602 aaKnown RBP20.27■□□□□ 0.83
SAMD1-202ENST00000533683 ZNF22P17026 224 aaPredicted RBP20.27■□□□□ 0.83
SAMD1-202ENST00000533683 TSPEAR-AS2P59090 65 aa20.26■□□□□ 0.83
SAMD1-202ENST00000533683 AMMECR1LQ6DCA0 310 aa20.25■□□□□ 0.83
SAMD1-202ENST00000533683 HIST1H4GQ99525 98 aa20.25■□□□□ 0.83
SAMD1-202ENST00000533683 F8P00451 2351 aa20.25■□□□□ 0.83
SAMD1-202ENST00000533683 TMEM223A0PJW6 202 aa20.25■□□□□ 0.83
SAMD1-202ENST00000533683 UBE2D3P61077 147 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 UBE2D2P62837 147 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 RBX1P62877 108 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 PLEKHB2Q96CS7 222 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 GAGE12JA6NER3 117 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 GAGE4Q13068 117 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 GAGE5Q13069 117 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 GAGE13Q4V321 117 aa20.24■□□□□ 0.83
SAMD1-202ENST00000533683 DAZ4Q86SG3 579 aaKnown RBP20.24■□□□□ 0.83
SAMD1-202ENST00000533683 DAZ3Q9NR90 486 aaKnown RBP20.24■□□□□ 0.83
SAMD1-202ENST00000533683 MRPS36P82909 103 aaKnown RBP20.23■□□□□ 0.83
SAMD1-202ENST00000533683 Q6ZUT4 128 aa20.23■□□□□ 0.83
SAMD1-202ENST00000533683 C9orf118A6NHY6 69 aa20.22■□□□□ 0.83
SAMD1-202ENST00000533683 CIDEAO60543 219 aa20.22■□□□□ 0.83
SAMD1-202ENST00000533683 SCGB1D4Q6XE38 83 aa20.22■□□□□ 0.83
SAMD1-202ENST00000533683 RAB37Q96AX2 223 aa20.22■□□□□ 0.83
SAMD1-202ENST00000533683 NTM-AS1Q6ZSK4 140 aa20.21■□□□□ 0.83
SAMD1-202ENST00000533683 J3QQQ9 107 aa20.21■□□□□ 0.83
SAMD1-202ENST00000533683 SMIM13P0DJ93 91 aa20.2■□□□□ 0.82
SAMD1-202ENST00000533683 TRBV6-4A0A1B0GX49 114 aa20.19■□□□□ 0.82
SAMD1-202ENST00000533683 TIMM21Q9BVV7 248 aa20.19■□□□□ 0.82
SAMD1-202ENST00000533683 TRGV4A0A0C4DH28 118 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms