RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 HERC2O95714 4834 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 COLCA2A8K830 154 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 GAS8-AS1O95177 125 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 PMCHP20382 165 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 PKIAP61925 76 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 TTC32Q5I0X7 151 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 KIR2DL4Q99706 377 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 MAP1LC3AQ9H492 121 aa11.81□□□□□ -0.52
CTSB-229ENST00000533572 TRBV6-8A0A0A6YYG3 113 aa11.8□□□□□ -0.52
CTSB-229ENST00000533572 SCO1O75880 301 aa11.8□□□□□ -0.52
CTSB-229ENST00000533572 NPYP01303 97 aa11.8□□□□□ -0.52
CTSB-229ENST00000533572 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
CTSB-229ENST00000533572 IGHV3-38A0A0C4DH36 116 aa11.79□□□□□ -0.52
CTSB-229ENST00000533572 RTL8CO15255 209 aa11.79□□□□□ -0.52
CTSB-229ENST00000533572 RAB5AP20339 215 aa11.79□□□□□ -0.52
CTSB-229ENST00000533572 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
CTSB-229ENST00000533572 K7EMI3 77 aa11.78□□□□□ -0.52
CTSB-229ENST00000533572 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
CTSB-229ENST00000533572 KIAA1644Q3SXP7 199 aa11.78□□□□□ -0.52
CTSB-229ENST00000533572 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
CTSB-229ENST00000533572 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
CTSB-229ENST00000533572 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.52
CTSB-229ENST00000533572 K7EP13 123 aa11.77□□□□□ -0.53
CTSB-229ENST00000533572 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
CTSB-229ENST00000533572 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
CTSB-229ENST00000533572 FCER1GP30273 86 aa11.76□□□□□ -0.53
CTSB-229ENST00000533572 H7C423 109 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 SIVA1O15304 175 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 AMTP48728 403 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 NTM-AS1Q6ZSK4 140 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 Q8N8P6 123 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
CTSB-229ENST00000533572 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
CTSB-229ENST00000533572 TMEM18Q96B42 140 aa11.74□□□□□ -0.53
CTSB-229ENST00000533572 TRAV9-2A0A087WT02 112 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 UBE2L6O14933 153 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 TSHBP01222 138 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 TRGC2P03986 189 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 G0S2P27469 103 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 PRSS3P2Q8NHM4 247 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 CHCHD5Q9BSY4 110 aa11.73□□□□□ -0.53
CTSB-229ENST00000533572 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
CTSB-229ENST00000533572 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
CTSB-229ENST00000533572 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
CTSB-229ENST00000533572 RAB5BP61020 215 aa11.72□□□□□ -0.53
CTSB-229ENST00000533572 DNAH2Q9P225 4427 aa11.72□□□□□ -0.53
CTSB-229ENST00000533572 A0A087WX48 190 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 ESDP10768 282 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 LINC01556Q5JQF7 62 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 NIT1Q86X76 327 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
CTSB-229ENST00000533572 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
CTSB-229ENST00000533572 C18orf32Q8TCD1 76 aa11.7□□□□□ -0.54
CTSB-229ENST00000533572 DNAH17Q9UFH2 4485 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 A0A1B0GVY2 172 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 BTF3P20290 206 aaKnown RBP11.69□□□□□ -0.54
CTSB-229ENST00000533572 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
CTSB-229ENST00000533572 LAGE3Q14657 143 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 FA2HQ7L5A8 372 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 KRTAP1-5Q9BYS1 174 aa11.69□□□□□ -0.54
CTSB-229ENST00000533572 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
CTSB-229ENST00000533572 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
CTSB-229ENST00000533572 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
CTSB-229ENST00000533572 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
CTSB-229ENST00000533572 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
CTSB-229ENST00000533572 FAT2Q9NYQ8 4349 aa11.67□□□□□ -0.54
CTSB-229ENST00000533572 RYR1P21817 5038 aa11.67□□□□□ -0.54
CTSB-229ENST00000533572 LINC00614P0C842 121 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 TNP2Q05952 138 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 Q0VG73 95 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 GAGE6Q13070 117 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 DEFB104AQ8WTQ1 72 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
CTSB-229ENST00000533572 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
CTSB-229ENST00000533572 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
CTSB-229ENST00000533572 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
CTSB-229ENST00000533572 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
CTSB-229ENST00000533572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
CTSB-229ENST00000533572 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
CTSB-229ENST00000533572 FGF6P10767 208 aa11.64□□□□□ -0.55
CTSB-229ENST00000533572 RBX1P62877 108 aa11.64□□□□□ -0.55
CTSB-229ENST00000533572 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
CTSB-229ENST00000533572 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
CTSB-229ENST00000533572 C1orf196B1AJZ1 125 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 IGHV3-33P01772 117 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 IGHV3-30-3P0DP02 117 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 NFE4Q86UQ8 179 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 KIAA1109Q2LD37 5005 aa11.63□□□□□ -0.55
CTSB-229ENST00000533572 IBA57-AS1B1ANH7 110 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms