RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 M0QY20 66 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 EREGO14944 169 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 TNFRSF6BO95407 300 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 OR10J3Q5JRS4 329 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 BAGE3Q86Y29 109 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 NRACQ8N912 160 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 LOC389332A0A1B0GUA5 103 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 CIDEAO60543 219 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 SMR3BP02814 79 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 S100A6P06703 90 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
TRAPPC4-213ENST00000533149 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 PPP1R17O96001 155 aa7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 SNRPEP62304 92 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 FHL2Q14192 279 aa7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 COA6Q5JTJ3 125 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 NIT1Q86X76 327 aa7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 KRTAP1-5Q9BYS1 174 aa7.77□□□□□ -1.17
TRAPPC4-213ENST00000533149 TRGV4A0A0C4DH28 118 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 PRSS47A8MTI9 375 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 H7C1H1 209 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 NUPR1O60356 82 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 MAP1LC3AQ9H492 121 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 NIT2Q9NQR4 276 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
TRAPPC4-213ENST00000533149 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 F5H768 121 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 HOXA5P20719 270 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 LINC00310P59036 64 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 Q9UF83 564 aa7.75□□□□□ -1.17
TRAPPC4-213ENST00000533149 C5orf52A6NGY3 159 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 SERF1AO75920 110 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 ATP5G1P05496 136 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 LINC00614P0C842 121 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 SUMO2P61956 95 aaKnown RBP7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 FA2HQ7L5A8 372 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 Q8N8P6 123 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
TRAPPC4-213ENST00000533149 FAT1Q14517 4588 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 TRBV10-1A0A0K0K1A3 114 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 K7EQD1 137 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 VCYO14598 125 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 NEXN-AS1Q8NBZ9 246 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 NXT2Q9NPJ8 142 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 HHLA3Q9XRX5 114 aa7.73□□□□□ -1.17
TRAPPC4-213ENST00000533149 SDHAF1A6NFY7 115 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 ESDP10768 282 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 PMCHP20382 165 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 CHCHD1Q96BP2 118 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
TRAPPC4-213ENST00000533149 GAGE12JA6NER3 117 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 CRYBA4P53673 196 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 GAGE1Q13065 139 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 GAGE4Q13068 117 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 GAGE5Q13069 117 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 RHOHQ15669 191 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 GAGE13Q4V321 117 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 PDZD11Q5EBL8 140 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 Q6ZRN7 208 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 PRO0255Q9UI72 69 aa7.71□□□□□ -1.18
TRAPPC4-213ENST00000533149 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 LINC01546A6NGU7 62 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 TCAPO15273 167 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 PAX4O43316 350 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 HSBP1O75506 76 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 GCSHP23434 173 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 FAM19A2Q8N3H0 131 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 DEFB104AQ8WTQ1 72 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 AP5S1Q9NUS5 200 aa7.7□□□□□ -1.18
TRAPPC4-213ENST00000533149 TRBV7-3A0A075B6L6 115 aa7.69□□□□□ -1.18
TRAPPC4-213ENST00000533149 PLA2G1BP04054 148 aaKnown RBP7.69□□□□□ -1.18
TRAPPC4-213ENST00000533149 S100A2P29034 98 aa7.69□□□□□ -1.18
TRAPPC4-213ENST00000533149 LAGE3Q14657 143 aa7.69□□□□□ -1.18
TRAPPC4-213ENST00000533149 VSIG2Q96IQ7 327 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms