RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
PKP3-209ENST00000533069 D6R8Y8 96 aa11.25□□□□□ -0.61
PKP3-209ENST00000533069 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
PKP3-209ENST00000533069 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
PKP3-209ENST00000533069 C20orf78Q9BR46 151 aa11.25□□□□□ -0.61
PKP3-209ENST00000533069 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
PKP3-209ENST00000533069 M0QY20 66 aa11.24□□□□□ -0.61
PKP3-209ENST00000533069 ALKBH7Q9BT30 221 aaPredicted RBP11.24□□□□□ -0.61
PKP3-209ENST00000533069 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
PKP3-209ENST00000533069 RYR1P21817 5038 aa11.23□□□□□ -0.61
PKP3-209ENST00000533069 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
PKP3-209ENST00000533069 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
PKP3-209ENST00000533069 CDK2AP2O75956 126 aa11.23□□□□□ -0.61
PKP3-209ENST00000533069 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
PKP3-209ENST00000533069 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
PKP3-209ENST00000533069 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
PKP3-209ENST00000533069 TCAPO15273 167 aa11.22□□□□□ -0.61
PKP3-209ENST00000533069 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
PKP3-209ENST00000533069 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
PKP3-209ENST00000533069 A0A087WTM6 91 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 K7EMI3 77 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
PKP3-209ENST00000533069 LAGE3Q14657 143 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
PKP3-209ENST00000533069 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 Q9UF83 564 aa11.21□□□□□ -0.61
PKP3-209ENST00000533069 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
PKP3-209ENST00000533069 Q0VG73 95 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 NRACQ8N912 160 aa11.2□□□□□ -0.62
PKP3-209ENST00000533069 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
PKP3-209ENST00000533069 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 NCR2O95944 276 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 PMCHP20382 165 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
PKP3-209ENST00000533069 PCLOQ9Y6V0 5065 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 VCYO14598 125 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 PSCAO43653 123 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 NPYP01303 97 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
PKP3-209ENST00000533069 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 UBE2D3P61077 147 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 UBE2D2P62837 147 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 TMEM97Q5BJF2 176 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 DAZ4Q86SG3 579 aaKnown RBP11.17□□□□□ -0.62
PKP3-209ENST00000533069 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 Q9HAA7 133 aa11.17□□□□□ -0.62
PKP3-209ENST00000533069 DAZ3Q9NR90 486 aaKnown RBP11.17□□□□□ -0.62
PKP3-209ENST00000533069 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 G0S2P27469 103 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 RPL39LQ96EH5 51 aaKnown RBP11.16□□□□□ -0.62
PKP3-209ENST00000533069 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
PKP3-209ENST00000533069 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
PKP3-209ENST00000533069 S100A6P06703 90 aa11.15□□□□□ -0.62
PKP3-209ENST00000533069 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.62
PKP3-209ENST00000533069 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
PKP3-209ENST00000533069 Q8N8P6 123 aa11.15□□□□□ -0.62
PKP3-209ENST00000533069 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
PKP3-209ENST00000533069 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
PKP3-209ENST00000533069 CHCHD7Q9BUK0 85 aa11.15□□□□□ -0.62
PKP3-209ENST00000533069 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
PKP3-209ENST00000533069 I3L3M4 83 aa11.14□□□□□ -0.63
PKP3-209ENST00000533069 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
PKP3-209ENST00000533069 NIT1Q86X76 327 aa11.14□□□□□ -0.63
PKP3-209ENST00000533069 Q8N3U1 123 aa11.14□□□□□ -0.63
PKP3-209ENST00000533069 LINC01546A6NGU7 62 aa11.13□□□□□ -0.63
PKP3-209ENST00000533069 LINC00614P0C842 121 aa11.13□□□□□ -0.63
PKP3-209ENST00000533069 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
PKP3-209ENST00000533069 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
PKP3-209ENST00000533069 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
PKP3-209ENST00000533069 A0A087WX48 190 aa11.12□□□□□ -0.63
PKP3-209ENST00000533069 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
PKP3-209ENST00000533069 GAS8-AS1O95177 125 aa11.12□□□□□ -0.63
PKP3-209ENST00000533069 HSPG2P98160 4391 aa11.12□□□□□ -0.63
PKP3-209ENST00000533069 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
PKP3-209ENST00000533069 FCER1GP30273 86 aa11.11□□□□□ -0.63
PKP3-209ENST00000533069 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms