RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 TRBV25-1A0A075B6N4 114 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 IGHV1-24A0A0C4DH33 117 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 TRBV6-5A0A0K0K1A5 114 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 TMEM262E9PQX1 116 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 IGHV3-30P01768 117 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 IGHV3-33P01772 117 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 HLA-DQA1P01909 254 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 APCSP02743 223 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 IGHV3-30-5P0DP03 117 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 AMTP48728 403 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 ELOBQ15370 118 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 CBLN2Q8IUK8 224 aa8.78□□□□□ -1
TRAPPC4-212ENST00000533058 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1
TRAPPC4-212ENST00000533058 I3L3M4 83 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 NFE4Q86UQ8 179 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 NRACQ8N912 160 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 GNB1LQ9BYB4 327 aa8.77□□□□□ -1.01
TRAPPC4-212ENST00000533058 A0A087WX48 190 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 VCYO14598 125 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 UBE2L6O14933 153 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 NPYP01303 97 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 MT-ND6P03923 174 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 FCER1GP30273 86 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 KIAA1644Q3SXP7 199 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 C10orf126Q8N4M7 172 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 C20orf78Q9BR46 151 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
TRAPPC4-212ENST00000533058 PKIAP61925 76 aa8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 GAGE6Q13070 117 aa8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 LINC01556Q5JQF7 62 aa8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 KIR2DL4Q99706 377 aa8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 TRAPPC1Q9Y5R8 145 aa8.75□□□□□ -1.01
TRAPPC4-212ENST00000533058 TRBV24-1A0A075B6N3 115 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 LOC389332A0A1B0GUA5 103 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 PHOX2AO14813 284 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 IQCJQ1A5X6 159 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 NIT1Q86X76 327 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 MAP1LC3AQ9H492 121 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 LAMTOR2Q9Y2Q5 125 aa8.74□□□□□ -1.01
TRAPPC4-212ENST00000533058 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
TRAPPC4-212ENST00000533058 TSHBP01222 138 aa8.73□□□□□ -1.01
TRAPPC4-212ENST00000533058 Q8N3U1 123 aa8.73□□□□□ -1.01
TRAPPC4-212ENST00000533058 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
TRAPPC4-212ENST00000533058 RAB5AP20339 215 aa8.72□□□□□ -1.01
TRAPPC4-212ENST00000533058 AMMECR1LQ6DCA0 310 aa8.72□□□□□ -1.01
TRAPPC4-212ENST00000533058 RYR1P21817 5038 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 C16orf90A8MZG2 172 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 SCO1O75880 301 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 MPV17L2Q567V2 206 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 YPEL4Q96NS1 127 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 CHCHD7Q9BUK0 85 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 Q9HAA7 133 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 KLK12Q9UKR0 248 aa8.71□□□□□ -1.02
TRAPPC4-212ENST00000533058 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 TCAPO15273 167 aa8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 ATP6V1G1O75348 118 aa8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 ANGP03950 147 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 S100A1P23297 94 aa8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 RNASEKQ6P5S7 137 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-212ENST00000533058 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
TRAPPC4-212ENST00000533058 RBX1P62877 108 aa8.69□□□□□ -1.02
TRAPPC4-212ENST00000533058 Q8N976 141 aa8.69□□□□□ -1.02
TRAPPC4-212ENST00000533058 H7C423 109 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 EREGO14944 169 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 CRPP02741 224 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 LAGE3Q14657 143 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 Q8N8P6 123 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 PRSS3P2Q8NHM4 247 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 TMEM18Q96B42 140 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 TMEM101Q96IK0 257 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
TRAPPC4-212ENST00000533058 A0A087WTM6 91 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 FGF6P10767 208 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 DGAT2L7PQ6IED9 249 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
TRAPPC4-212ENST00000533058 TRAV8-3A0A0A6YYJ7 113 aa8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 PSCAO43653 123 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms