RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793		P01737	135 aa		6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793	GNG4	P50150	75 aa		6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793	NKX2-5	P52952	324 aa	Predicted RBP	6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793	NTM-AS1	Q6ZSK4	140 aa		6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793	SMIM12	Q96EX1	92 aa		6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793	TMEM243	Q9BU79	118 aa		6.23	□□□□□ -1.41
PPFIA1-223	ENST00000532793		M0QY20	66 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	GZMB	P10144	247 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	SULT1A2	P50226	295 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	RAB5C	P51148	216 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	SUMO4	Q6EEV6	95 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	RASL11A	Q6T310	242 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	C11orf52	Q96A22	123 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	DPH3P1	Q9H4G8	78 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	PLA2G2D	Q9UNK4	145 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	KIF25-AS1	Q9Y6Z4	181 aa		6.22	□□□□□ -1.41
PPFIA1-223	ENST00000532793	IGHV3-64	A0A075B6Q5	118 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	PDE6D	O43924	150 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	IGLC6	P0CF74	106 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	AMT	P48728	403 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	CCL20	P78556	96 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	COTL1	Q14019	142 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793	NIT2	Q9NQR4	276 aa		6.21	□□□□□ -1.42
PPFIA1-223	ENST00000532793		A0A1B0GUV1	79 aa		6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	KRTAP10-4	P60372	401 aa	Predicted RBP	6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	MEF2B	Q02080	365 aa	Predicted RBP	6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	CFAP161	Q6P656	301 aa		6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	SMIM15	Q7Z3B0	74 aa		6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	PGLYRP4	Q96LB8	373 aa		6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	MED9	Q9NWA0	146 aa		6.2	□□□□□ -1.42
PPFIA1-223	ENST00000532793	TRAV1-1	A0A0B4J248	108 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	RAB19	A4D1S5	217 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	NTF3	P20783	257 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	CNBP	P62633	177 aa	Known RBP	6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	TWIST1	Q15672	202 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	AMMECR1L	Q6DCA0	310 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	LYZL1	Q6UWQ5	148 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	C20orf203	Q8NBC4	194 aa		6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	SRRM2	Q9UQ35	2752 aa	Known RBP	6.19	□□□□□ -1.42
PPFIA1-223	ENST00000532793	IGLV4-60	A0A075B6I1	120 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	IGKV3OR2-268	A0A0C4DH90	116 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	C19orf71	A6NCJ1	209 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793		Q6ZNX1	250 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	SDIM1	Q6ZPB5	146 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	RNF185	Q96GF1	192 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	HERC1	Q15751	4861 aa		6.18	□□□□□ -1.42
PPFIA1-223	ENST00000532793	BCL2	P10415	239 aa		6.17	□□□□□ -1.42
PPFIA1-223	ENST00000532793	TAGLN2	P37802	199 aa	Known RBP	6.17	□□□□□ -1.42
PPFIA1-223	ENST00000532793	RNASEK	Q6P5S7	137 aa	Known RBP	6.17	□□□□□ -1.42
PPFIA1-223	ENST00000532793	KRTAP26-1	Q6PEX3	210 aa		6.17	□□□□□ -1.42
PPFIA1-223	ENST00000532793	C7orf33	Q8WU49	177 aa		6.17	□□□□□ -1.42
PPFIA1-223	ENST00000532793	GAGE12H	A6NDE8	117 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	EIF4EBP3	O60516	100 aa	Predicted RBP	6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	APCS	P02743	223 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	CTRL	P40313	264 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	TEX261	Q6UWH6	196 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793		Q6ZRU5	148 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	C9orf62	Q8N4C0	152 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	BORCS7	Q96B45	105 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	RPP21	Q9H633	154 aa	Known RBP	6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793	PKIG	Q9Y2B9	76 aa		6.16	□□□□□ -1.42
PPFIA1-223	ENST00000532793		A0A087WYN8	130 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	PANO1	I0J062	215 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	NCR2	O95944	276 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	TCTE3	Q8IZS6	198 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	NUDT10	Q8NFP7	164 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	NUDT11	Q96G61	164 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	BTF3L4	Q96K17	158 aa		6.15	□□□□□ -1.42
PPFIA1-223	ENST00000532793	VPS13B	Q7Z7G8	4022 aa		6.15	□□□□□ -1.43
PPFIA1-223	ENST00000532793	TRAV26-2	A0A0B4J265	109 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793		H7C423	109 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	NDUFS6	O75380	124 aa	Known RBP	6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CHTF8	P0CG12	524 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	RPS10	P46783	165 aa	Known RBP	6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	HNRNPA3	P51991	378 aa	Known RBP	6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CIRBP	Q14011	172 aa	Known RBP	6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	HIGD2B	Q4VC39	106 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SPACA4	Q8TDM5	124 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	TMEM101	Q96IK0	257 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	GFRA4	Q9GZZ7	299 aa		6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	RNASE7	Q9H1E1	156 aa	Known RBP	6.14	□□□□□ -1.43
PPFIA1-223	ENST00000532793	MYCBP2	O75592	4640 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	TRBV20OR9-2	A0A075B6H5	130 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	IGKV2-24	A0A0C4DH68	120 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	ZNF25	P17030	456 aa	Predicted RBP	6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	PMCH	P20382	165 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	COX6A2	Q02221	97 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	MAJIN	Q3KP22	176 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SLC51B	Q86UW2	128 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	GATD1	Q8NB37	220 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	GTSF1	Q8WW33	167 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CNFN	Q9BYD5	112 aa		6.13	□□□□□ -1.43
PPFIA1-223	ENST00000532793	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SDHAF1	A6NFY7	115 aa		6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793		I3L3M4	83 aa		6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793	GATC	O43716	136 aa	Known RBP	6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793	FGF6	P10767	208 aa		6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793	C15orf56	Q8N910	161 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms