RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 C14orf177Q52M58 125 aa14.96□□□□□ -0.01
LTBP3-220ENST00000532661 SRSF3P84103 164 aaKnown RBP14.95□□□□□ -0.02
LTBP3-220ENST00000532661 SLC7A5P1Q8MH63 180 aa14.95□□□□□ -0.02
LTBP3-220ENST00000532661 CHAC1Q9BUX1 264 aa14.95□□□□□ -0.02
LTBP3-220ENST00000532661 RPP21Q9H633 154 aaKnown RBP14.95□□□□□ -0.02
LTBP3-220ENST00000532661 PLA2G1BP04054 148 aaKnown RBP14.94□□□□□ -0.02
LTBP3-220ENST00000532661 PRSS1P07477 247 aa14.94□□□□□ -0.02
LTBP3-220ENST00000532661 TWIST1Q15672 202 aa14.94□□□□□ -0.02
LTBP3-220ENST00000532661 WDR73Q6P4I2 378 aa14.94□□□□□ -0.02
LTBP3-220ENST00000532661 CIRBP-AS1Q8TBR5 109 aa14.94□□□□□ -0.02
LTBP3-220ENST00000532661 NIT2Q9NQR4 276 aa14.94□□□□□ -0.02
LTBP3-220ENST00000532661 C20orf203Q8NBC4 194 aa14.93□□□□□ -0.02
LTBP3-220ENST00000532661 IGLV4-60A0A075B6I1 120 aa14.92□□□□□ -0.02
LTBP3-220ENST00000532661 TMEM243Q9BU79 118 aa14.92□□□□□ -0.02
LTBP3-220ENST00000532661 CNFNQ9BYD5 112 aa14.92□□□□□ -0.02
LTBP3-220ENST00000532661 IGLV10-54A0A075B6I4 117 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 C9JQL5 133 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 TMEM250H0YL14 139 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 SRP19P09132 144 aaKnown RBP14.91□□□□□ -0.02
LTBP3-220ENST00000532661 REG3AQ06141 175 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 GTSF1Q8WW33 167 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 GFRA4Q9GZZ7 299 aa14.91□□□□□ -0.02
LTBP3-220ENST00000532661 TRAV26-2A0A0B4J265 109 aa14.9□□□□□ -0.02
LTBP3-220ENST00000532661 GATD1Q8NB37 220 aa14.9□□□□□ -0.02
LTBP3-220ENST00000532661 PGLYRP4Q96LB8 373 aa14.9□□□□□ -0.02
LTBP3-220ENST00000532661 FOXA3P55318 350 aaPredicted RBP14.89□□□□□ -0.03
LTBP3-220ENST00000532661 A0A1B0GUV1 79 aa14.87□□□□□ -0.03
LTBP3-220ENST00000532661 COTL1Q14019 142 aa14.87□□□□□ -0.03
LTBP3-220ENST00000532661 TMEM218A2RU14 115 aa14.86□□□□□ -0.03
LTBP3-220ENST00000532661 GATCO43716 136 aaKnown RBP14.86□□□□□ -0.03
LTBP3-220ENST00000532661 AMTP48728 403 aa14.86□□□□□ -0.03
LTBP3-220ENST00000532661 CEBPGP53567 150 aa14.86□□□□□ -0.03
LTBP3-220ENST00000532661 KRTAP10-4P60372 401 aaPredicted RBP14.86□□□□□ -0.03
LTBP3-220ENST00000532661 DGAT2L7PQ6IED9 249 aa14.86□□□□□ -0.03
LTBP3-220ENST00000532661 C9orf163Q8N9P6 203 aa14.85□□□□□ -0.03
LTBP3-220ENST00000532661 RPL39LQ96EH5 51 aaKnown RBP14.85□□□□□ -0.03
LTBP3-220ENST00000532661 UBE2L6O14933 153 aa14.84□□□□□ -0.03
LTBP3-220ENST00000532661 TRAV8-4A0A0B4J246 113 aa14.83□□□□□ -0.04
LTBP3-220ENST00000532661 J3QL48 77 aa14.83□□□□□ -0.04
LTBP3-220ENST00000532661 FAM231DQ6ZW35 169 aa14.83□□□□□ -0.04
LTBP3-220ENST00000532661 FAM74A3Q4VXF1 159 aa14.82□□□□□ -0.04
LTBP3-220ENST00000532661 PANO1I0J062 215 aa14.81□□□□□ -0.04
LTBP3-220ENST00000532661 SMIM15Q7Z3B0 74 aa14.81□□□□□ -0.04
LTBP3-220ENST00000532661 CLRN3Q8NCR9 226 aa14.81□□□□□ -0.04
LTBP3-220ENST00000532661 SEC11CQ9BY50 192 aa14.81□□□□□ -0.04
LTBP3-220ENST00000532661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.81□□□□□ -0.04
LTBP3-220ENST00000532661 ZNF727A8MUV8 499 aa14.8□□□□□ -0.04
LTBP3-220ENST00000532661 A8MWL6 223 aa14.8□□□□□ -0.04
LTBP3-220ENST00000532661 F8W036 122 aa14.8□□□□□ -0.04
LTBP3-220ENST00000532661 ADCYAP1P18509 176 aa14.8□□□□□ -0.04
LTBP3-220ENST00000532661 SMIM7Q9BQ49 75 aa14.8□□□□□ -0.04
LTBP3-220ENST00000532661 hDV102S1A0JD36 115 aa14.79□□□□□ -0.04
LTBP3-220ENST00000532661 ATP6V1G1O75348 118 aa14.79□□□□□ -0.04
LTBP3-220ENST00000532661 C10orf91Q5T1B1 145 aa14.79□□□□□ -0.04
LTBP3-220ENST00000532661 SDIM1Q6ZPB5 146 aa14.79□□□□□ -0.04
LTBP3-220ENST00000532661 LRP1Q07954 4544 aaKnown RBP14.78□□□□□ -0.04
LTBP3-220ENST00000532661 IGKV3OR2-268A0A0C4DH90 116 aa14.78□□□□□ -0.04
LTBP3-220ENST00000532661 SLPIP03973 132 aa14.78□□□□□ -0.04
LTBP3-220ENST00000532661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.77□□□□□ -0.05
LTBP3-220ENST00000532661 IGKV2-29A2NJV5 120 aaPredicted RBP14.77□□□□□ -0.05
LTBP3-220ENST00000532661 KRTAP29-1A8MX34 341 aaPredicted RBP14.77□□□□□ -0.05
LTBP3-220ENST00000532661 GAS8-AS1O95177 125 aa14.77□□□□□ -0.05
LTBP3-220ENST00000532661 LINC01551Q86U37 167 aa14.77□□□□□ -0.05
LTBP3-220ENST00000532661 CARHSP1Q9Y2V2 147 aaKnown RBP14.77□□□□□ -0.05
LTBP3-220ENST00000532661 GAGE12HA6NDE8 117 aa14.76□□□□□ -0.05
LTBP3-220ENST00000532661 SDHAF1A6NFY7 115 aa14.76□□□□□ -0.05
LTBP3-220ENST00000532661 CNBPP62633 177 aaKnown RBP14.76□□□□□ -0.05
LTBP3-220ENST00000532661 CT83Q5H943 113 aa14.76□□□□□ -0.05
LTBP3-220ENST00000532661 NCR2O95944 276 aa14.75□□□□□ -0.05
LTBP3-220ENST00000532661 NAT8Q9UHE5 227 aa14.75□□□□□ -0.05
LTBP3-220ENST00000532661 APCSP02743 223 aa14.74□□□□□ -0.05
LTBP3-220ENST00000532661 TMEM241Q24JQ0 296 aa14.74□□□□□ -0.05
LTBP3-220ENST00000532661 AMMECR1LQ6DCA0 310 aa14.74□□□□□ -0.05
LTBP3-220ENST00000532661 RNASEKQ6P5S7 137 aaKnown RBP14.74□□□□□ -0.05
LTBP3-220ENST00000532661 FAT3Q8TDW7 4589 aa14.74□□□□□ -0.05
LTBP3-220ENST00000532661 FAM231BA6NCW3 169 aa14.73□□□□□ -0.05
LTBP3-220ENST00000532661 S100A1P23297 94 aa14.73□□□□□ -0.05
LTBP3-220ENST00000532661 TSKUQ8WUA8 353 aa14.73□□□□□ -0.05
LTBP3-220ENST00000532661 TRBV6-5A0A0K0K1A5 114 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 HIGD1CA8MV81 97 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 FGF6P10767 208 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 PMCHP20382 165 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 RPL37AP61513 92 aaKnown RBP14.72□□□□□ -0.05
LTBP3-220ENST00000532661 PNRC1Q12796 327 aaPredicted RBP14.72□□□□□ -0.05
LTBP3-220ENST00000532661 C15orf56Q8N910 161 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 BORCS7Q96B45 105 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 AP5S1Q9NUS5 200 aa14.72□□□□□ -0.05
LTBP3-220ENST00000532661 PKHD1L1Q86WI1 4243 aa14.71□□□□□ -0.05
LTBP3-220ENST00000532661 A0A1B0GUT8 65 aa14.71□□□□□ -0.05
LTBP3-220ENST00000532661 I3L3M4 83 aa14.71□□□□□ -0.05
LTBP3-220ENST00000532661 RNF185Q96GF1 192 aa14.71□□□□□ -0.05
LTBP3-220ENST00000532661 OSTCQ9NRP0 149 aa14.71□□□□□ -0.05
LTBP3-220ENST00000532661 RPL23P62829 140 aaKnown RBP14.7□□□□□ -0.06
LTBP3-220ENST00000532661 CHCHD10Q8WYQ3 142 aaPredicted RBP14.7□□□□□ -0.06
LTBP3-220ENST00000532661 TMEM191AQ9H0A3 160 aa14.7□□□□□ -0.06
LTBP3-220ENST00000532661 IGHV3-64A0A075B6Q5 118 aa14.69□□□□□ -0.06
LTBP3-220ENST00000532661 H7C423 109 aa14.69□□□□□ -0.06
LTBP3-220ENST00000532661 TSHBP01222 138 aa14.69□□□□□ -0.06
LTBP3-220ENST00000532661 APOC3P02656 99 aa14.69□□□□□ -0.06
LTBP3-220ENST00000532661 CHTF8P0CG12 524 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms