RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
CTSB-226ENST00000532656 NIT2Q9NQR4 276 aa10.81□□□□□ -0.68
CTSB-226ENST00000532656 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 COTL1Q14019 142 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 ZNF345Q14585 488 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 ODF1Q14990 250 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 GNG13Q9P2W3 67 aa10.8□□□□□ -0.68
CTSB-226ENST00000532656 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 RPS10P46783 165 aaKnown RBP10.79□□□□□ -0.68
CTSB-226ENST00000532656 CCL20P78556 96 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 LYZL1Q6UWQ5 148 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 GTSF1Q8WW33 167 aa10.79□□□□□ -0.68
CTSB-226ENST00000532656 NDUFS6O75380 124 aaKnown RBP10.78□□□□□ -0.68
CTSB-226ENST00000532656 MANBALQ9NQG1 85 aa10.78□□□□□ -0.68
CTSB-226ENST00000532656 XKRY2A2RUG3 117 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 F2Z2F3 143 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 NTF3P20783 257 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
CTSB-226ENST00000532656 STPG4Q8N801 248 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 LYPD6BQ8NI32 183 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
CTSB-226ENST00000532656 KANTRA0A1W2PQU2 76 aa10.76□□□□□ -0.69
CTSB-226ENST00000532656 BCL2L11O43521 198 aa10.76□□□□□ -0.69
CTSB-226ENST00000532656 IFNA1P01562 189 aa10.76□□□□□ -0.69
CTSB-226ENST00000532656 GNG4P50150 75 aa10.76□□□□□ -0.69
CTSB-226ENST00000532656 TRAV26-2A0A0B4J265 109 aa10.75□□□□□ -0.69
CTSB-226ENST00000532656 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
CTSB-226ENST00000532656 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
CTSB-226ENST00000532656 AMMECR1LQ6DCA0 310 aa10.74□□□□□ -0.69
CTSB-226ENST00000532656 GATD1Q8NB37 220 aa10.74□□□□□ -0.69
CTSB-226ENST00000532656 TRBV20OR9-2A0A075B6H5 130 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.73□□□□□ -0.69
CTSB-226ENST00000532656 A0A096LNI7 61 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 IGKV2-29A2NJV5 120 aaPredicted RBP10.73□□□□□ -0.69
CTSB-226ENST00000532656 HMSDA8MTL9 139 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 RGS21Q2M5E4 152 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 Q6ZNX1 250 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 SMIM12Q96EX1 92 aa10.73□□□□□ -0.69
CTSB-226ENST00000532656 GVQW2A0A096LPI5 108 aaPredicted RBP10.72□□□□□ -0.69
CTSB-226ENST00000532656 CTRLP40313 264 aa10.72□□□□□ -0.69
CTSB-226ENST00000532656 EIF5AP63241 154 aaKnown RBP10.72□□□□□ -0.69
CTSB-226ENST00000532656 TWIST1Q15672 202 aa10.72□□□□□ -0.69
CTSB-226ENST00000532656 RNASEKQ6P5S7 137 aaKnown RBP10.72□□□□□ -0.69
CTSB-226ENST00000532656 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
CTSB-226ENST00000532656 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
CTSB-226ENST00000532656 TRAV1-1A0A0B4J248 108 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 A0A0J9YXV3 536 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 MEF2BQ02080 365 aaPredicted RBP10.7□□□□□ -0.7
CTSB-226ENST00000532656 FOXI1Q12951 378 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 NUDT10Q8NFP7 164 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 NUDT11Q96G61 164 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
CTSB-226ENST00000532656 PDE6DO43924 150 aa10.69□□□□□ -0.7
CTSB-226ENST00000532656 APCSP02743 223 aa10.69□□□□□ -0.7
CTSB-226ENST00000532656 FGF6P10767 208 aa10.69□□□□□ -0.7
CTSB-226ENST00000532656 LINC00526Q96FQ7 95 aa10.69□□□□□ -0.7
CTSB-226ENST00000532656 BIN3Q9NQY0 253 aa10.69□□□□□ -0.7
CTSB-226ENST00000532656 NCR2O95944 276 aa10.68□□□□□ -0.7
CTSB-226ENST00000532656 XCL1P47992 114 aa10.68□□□□□ -0.7
CTSB-226ENST00000532656 CNFNQ9BYD5 112 aa10.68□□□□□ -0.7
CTSB-226ENST00000532656 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
CTSB-226ENST00000532656 FOXA3P55318 350 aaPredicted RBP10.67□□□□□ -0.7
CTSB-226ENST00000532656 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
CTSB-226ENST00000532656 REG3GQ6UW15 175 aa10.67□□□□□ -0.7
CTSB-226ENST00000532656 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
CTSB-226ENST00000532656 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
CTSB-226ENST00000532656 RPP21Q9H633 154 aaKnown RBP10.67□□□□□ -0.7
CTSB-226ENST00000532656 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
CTSB-226ENST00000532656 H7C423 109 aa10.66□□□□□ -0.7
CTSB-226ENST00000532656 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
CTSB-226ENST00000532656 LINC00474Q9P2X8 69 aa10.66□□□□□ -0.7
CTSB-226ENST00000532656 CCL25O15444 150 aa10.65□□□□□ -0.7
CTSB-226ENST00000532656 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
CTSB-226ENST00000532656 IGHV1-58A0A0C4DH39 117 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 K7EN84 100 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 BCL2P10415 239 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 ZNF25P17030 456 aaPredicted RBP10.64□□□□□ -0.71
CTSB-226ENST00000532656 SMIM15Q7Z3B0 74 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
CTSB-226ENST00000532656 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
CTSB-226ENST00000532656 PMCHP20382 165 aa10.63□□□□□ -0.71
CTSB-226ENST00000532656 Q6ZRP5 223 aa10.63□□□□□ -0.71
CTSB-226ENST00000532656 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
CTSB-226ENST00000532656 PKIGQ9Y2B9 76 aa10.63□□□□□ -0.71
CTSB-226ENST00000532656 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
CTSB-226ENST00000532656 OCC1Q8TAD7 63 aa10.62□□□□□ -0.71
CTSB-226ENST00000532656 I3L3M4 83 aa10.61□□□□□ -0.71
CTSB-226ENST00000532656 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
CTSB-226ENST00000532656 EIF5AL1Q6IS14 154 aaKnown RBP10.61□□□□□ -0.71
CTSB-226ENST00000532656 TEX261Q6UWH6 196 aa10.61□□□□□ -0.71
CTSB-226ENST00000532656 ZNF561-AS1K7EIQ3 104 aa10.6□□□□□ -0.71
CTSB-226ENST00000532656 GAS8-AS1O95177 125 aa10.6□□□□□ -0.71
CTSB-226ENST00000532656 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms