RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TNFRSF6BO95407 300 aa8.64□□□□□ -1.03
COPB1-208ENST00000532088 NCR2O95944 276 aa8.64□□□□□ -1.03
COPB1-208ENST00000532088 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
COPB1-208ENST00000532088 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
COPB1-208ENST00000532088 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
COPB1-208ENST00000532088 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 RAB5AP20339 215 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 CCL18P55774 89 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 FABP9Q0Z7S8 132 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 LYPD5Q6UWN5 251 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 TMEM70Q9BUB7 260 aa8.63□□□□□ -1.03
COPB1-208ENST00000532088 I3L3M4 83 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 VCYO14598 125 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 TCAPO15273 167 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 NPYP01303 97 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 ESRGQ1W209 222 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 LELP1Q5T871 98 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 ALKBH7Q9BT30 221 aaPredicted RBP8.62□□□□□ -1.03
COPB1-208ENST00000532088 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
COPB1-208ENST00000532088 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
COPB1-208ENST00000532088 K7EMI3 77 aa8.61□□□□□ -1.03
COPB1-208ENST00000532088 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
COPB1-208ENST00000532088 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
COPB1-208ENST00000532088 COTL1Q14019 142 aa8.6□□□□□ -1.03
COPB1-208ENST00000532088 KIAA1644Q3SXP7 199 aa8.6□□□□□ -1.03
COPB1-208ENST00000532088 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
COPB1-208ENST00000532088 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
COPB1-208ENST00000532088 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
COPB1-208ENST00000532088 PMCHP20382 165 aa8.59□□□□□ -1.03
COPB1-208ENST00000532088 IQCJQ1A5X6 159 aa8.59□□□□□ -1.03
COPB1-208ENST00000532088 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
COPB1-208ENST00000532088 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
COPB1-208ENST00000532088 IGLV2-18A0A075B6J9 118 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 TRBV25-1A0A075B6N4 114 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 IGHV1-24A0A0C4DH33 117 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 PKIAP61925 76 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 Q8N8P6 123 aa8.58□□□□□ -1.04
COPB1-208ENST00000532088 ALMS1Q8TCU4 4167 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 H7C423 109 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 TSHBP01222 138 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 TRGC2P03986 189 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 VPS13DQ5THJ4 4388 aa8.57□□□□□ -1.04
COPB1-208ENST00000532088 K7EP13 123 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 ESDP10768 282 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 FCER1GP30273 86 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 AMTP48728 403 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 DNAH1Q9P2D7 4330 aa8.56□□□□□ -1.04
COPB1-208ENST00000532088 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
COPB1-208ENST00000532088 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 SIVA1O15304 175 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 G0S2P27469 103 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 RAB5BP61020 215 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 SMAGPQ0VAQ4 97 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 Q0VG73 95 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
COPB1-208ENST00000532088 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
COPB1-208ENST00000532088 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
COPB1-208ENST00000532088 NIT1Q86X76 327 aa8.53□□□□□ -1.04
COPB1-208ENST00000532088 Q9H8V8 135 aa8.53□□□□□ -1.04
COPB1-208ENST00000532088 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 LINC00614P0C842 121 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 LAGE3Q14657 143 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 FA2HQ7L5A8 372 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 WFDC10BQ8IUB3 73 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
COPB1-208ENST00000532088 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 LCE6AA0A183 80 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 UBE2L6O14933 153 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 LY6G6CO95867 125 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
COPB1-208ENST00000532088 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
COPB1-208ENST00000532088 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 LCE1DQ5T752 114 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 MRPL52Q86TS9 123 aaKnown RBP8.51□□□□□ -1.05
COPB1-208ENST00000532088 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
COPB1-208ENST00000532088 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
COPB1-208ENST00000532088 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
COPB1-208ENST00000532088 LYSTQ99698 3801 aa8.5□□□□□ -1.05
COPB1-208ENST00000532088 TRAV9-2A0A087WT02 112 aa8.5□□□□□ -1.05
COPB1-208ENST00000532088 A0A087WX48 190 aa8.5□□□□□ -1.05
COPB1-208ENST00000532088 C1orf196B1AJZ1 125 aa8.5□□□□□ -1.05
COPB1-208ENST00000532088 LCE4AQ5TA78 99 aa8.5□□□□□ -1.05
COPB1-208ENST00000532088 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms