RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ARHGAP21Q5T5U3 1957 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 H3BPC8 53 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 MGST1P10620 155 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 IGLV3-21P80748 117 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 DEFB103AP81534 67 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 LPAL2Q16609 132 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 TMEM105Q8N8V8 129 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 hDV103S1A0JD37 113 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 CLPSP04118 112 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 IGKV2-30P06310 120 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 ROMO1P60602 79 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 FAM27BQ5VT28 67 aa3.4□□□□□ -1.86
ECHDC1-222ENST00000531967 AGRNO00468 2067 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 Q6ZR03 302 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 PRRC2BQ5JSZ5 2229 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 SPTBP11277 2137 aa3.4□□□□□ -1.87
ECHDC1-222ENST00000531967 IGKV1D-42A0A075B6H8 117 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 A0A096LNJ9 63 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 Q5W150 140 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 CTXND1A0A1B0GTU2 59 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 H7C2G1 150 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 C15orf32Q32M92 178 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 C1orf134Q5TEV5 83 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 Q6ZQT0 140 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 DYNLRB1Q9NP97 96 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 FAM215AQ9Y5M1 114 aa3.39□□□□□ -1.87
ECHDC1-222ENST00000531967 A0A0J9YWU9 116 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 PANO1I0J062 215 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 PPYP01298 95 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 IGHV3-53P01767 116 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 IFI27L1Q96BM0 104 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 ARHGAP5-AS1Q96IT6 56 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 FREM3P0C091 2139 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 DIDO1Q9BTC0 2240 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 NDUFC1O43677 76 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 LYPD5Q6UWN5 251 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 FAM223AQ8IWN6 122 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 TNRC6BQ9UPQ9 1833 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 MALRD1Q5VYJ5 2156 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
ECHDC1-222ENST00000531967 TRBV6-6A0A0A6YYG2 114 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 RHOHQ15669 191 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 GOLGA4Q13439 2230 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 C11orf86A6NJI1 115 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 H7BZZ5 65 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 CRPP02741 224 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 IGLV7-43P04211 117 aa3.37□□□□□ -1.87
ECHDC1-222ENST00000531967 TRBV7-1A0A0A6YYK4 115 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 TEX49A0A1B0GTD5 131 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 IQCF6A8MYZ5 107 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 IGLV1-47P01700 117 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 IGLV3-1P01715 115 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 NNATQ16517 81 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 CEP192Q8TEP8 1941 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 MUC4Q99102 2169 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 C5orf67F2Z3F1 127 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 STATHP02808 62 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 ATXN8Q156A1 80 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 PROK2Q9HC23 129 aa3.36□□□□□ -1.87
ECHDC1-222ENST00000531967 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 IGKV1D-17A0A075B6S4 117 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 RPS27P42677 84 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 Q1T7F1 81 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 Q6ZR54 194 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 LINC00269Q8N2A0 174 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 DYNLRB2Q8TF09 96 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 MRPL35Q9NZE8 188 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 V9GYV3 84 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 DOCK11Q5JSL3 2073 aa3.35□□□□□ -1.87
ECHDC1-222ENST00000531967 ZNF318Q5VUA4 2279 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 NCOA6Q14686 2063 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 PCDH15Q96QU1 1955 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 BCE1O60756 84 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 UBE2D1P51668 147 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 LHFPL6Q9Y693 200 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 CACNA1CQ13936 2221 aa3.34□□□□□ -1.87
ECHDC1-222ENST00000531967 LAMA2P24043 3122 aaKnown RBP3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 H0YGG7 62 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 H3BSH0 61 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 KLKP1Q107X0 134 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 SPANXN1Q5VSR9 72 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 Q6ZS52 159 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 NDUFA11Q86Y39 141 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 MINOS1-NBL1R4GNA1 71 aa3.34□□□□□ -1.88
ECHDC1-222ENST00000531967 IGHV1-18A0A0C4DH31 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms