RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 PEMTQ9UBM1 199 aa8.43□□□□□ -1.06
NXF1-211ENST00000531709 ZNF580Q9UK33 172 aa8.43□□□□□ -1.06
NXF1-211ENST00000531709 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
NXF1-211ENST00000531709 ANKRD17O75179 2603 aaKnown RBP8.43□□□□□ -1.06
NXF1-211ENST00000531709 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
NXF1-211ENST00000531709 TRBV7-9A0A0J9YWB2 115 aa8.42□□□□□ -1.06
NXF1-211ENST00000531709 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 LGALS9O00182 355 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 UBE2D1P51668 147 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 TRAV26-1A0A087WT03 109 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 CFHR3Q02985 330 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 MUC4Q99102 2169 aa8.41□□□□□ -1.06
NXF1-211ENST00000531709 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 K7EQG2 157 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 Q6ZUT4 128 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 CRYBA4P53673 196 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 PRIMA1Q86XR5 153 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 YAE1D1Q9NRH1 226 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 DOPEY1Q5JWR5 2465 aa8.4□□□□□ -1.06
NXF1-211ENST00000531709 H3BMM0 161 aa8.4□□□□□ -1.07
NXF1-211ENST00000531709 UBE2WQ96B02 151 aa8.4□□□□□ -1.07
NXF1-211ENST00000531709 HIVEP2P31629 2446 aa8.4□□□□□ -1.07
NXF1-211ENST00000531709 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 CLEC2BQ92478 149 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 GAGE12JA6NER3 117 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 INSP01308 110 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
NXF1-211ENST00000531709 LINC00315P59091 139 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 GAGE4Q13068 117 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 GAGE5Q13069 117 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 XGP55808 180 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 TMEM61Q8N0U2 210 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
NXF1-211ENST00000531709 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 LINC01619G3V211 115 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 GATA3P23771 443 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 PSMB8P28062 276 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 ELANEP08246 267 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 RPL36AP83881 106 aaKnown RBP8.38□□□□□ -1.07
NXF1-211ENST00000531709 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 RPL36ALQ969Q0 106 aaKnown RBP8.38□□□□□ -1.07
NXF1-211ENST00000531709 Q9H8V8 135 aa8.38□□□□□ -1.07
NXF1-211ENST00000531709 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 ACANP16112 2415 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
NXF1-211ENST00000531709 DSCR9P59020 149 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 NSUN5P1Q3KNT7 163 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 C18orf65Q6ZTR6 163 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 C9orf85Q96MD7 179 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
NXF1-211ENST00000531709 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 RPL35AP18077 110 aaKnown RBP8.36□□□□□ -1.07
NXF1-211ENST00000531709 Q6ZSV7 163 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 C11orf68Q9H3H3 251 aaKnown RBP8.36□□□□□ -1.07
NXF1-211ENST00000531709 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
NXF1-211ENST00000531709 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 UBE2D3P61077 147 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 UBE2D2P62837 147 aa8.36□□□□□ -1.07
NXF1-211ENST00000531709 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 B5MCH6 92 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 TRIAP1O43715 76 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 RPL32P62910 135 aaKnown RBP8.35□□□□□ -1.07
NXF1-211ENST00000531709 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 DNAL4O96015 105 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 PRB1P04280 392 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 RNF183Q96D59 192 aa8.35□□□□□ -1.07
NXF1-211ENST00000531709 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 CITED1Q99966 193 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 LINC00158P58513 81 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 FAM19A4Q96LR4 140 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 SPANXA1Q9NS26 97 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 Q9UF83 564 aa8.34□□□□□ -1.07
NXF1-211ENST00000531709 NXPH4O95158 308 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
NXF1-211ENST00000531709 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 GAGE7O76087 117 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
NXF1-211ENST00000531709 SS18L2Q9UHA2 77 aa8.33□□□□□ -1.08
NXF1-211ENST00000531709 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
NXF1-211ENST00000531709 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
NXF1-211ENST00000531709 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms