RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 IGFL3Q6UXB1 125 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 ZNF833PQ6ZTB9 187 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 C9orf106Q8NAJ2 232 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 WDFY4Q6ZS81 3184 aa3.41□□□□□ -1.86
ECHDC1-221ENST00000531582 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 A0A087WZ39 114 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 IGLV5-52A0A0A0MRZ9 124 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 TRBV6-8A0A0A6YYG3 113 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 HCG22E2RYF7 251 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 M0R1W7 72 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 ZNHIT1O43257 154 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 FXYD7P58549 80 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 CCL14Q16627 93 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 MIAQ16674 131 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 PIGYQ3MUY2 71 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 FREM1Q5H8C1 2179 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 SMIM14Q96QK8 99 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 TMEM14BQ9NUH8 114 aa3.4□□□□□ -1.87
ECHDC1-221ENST00000531582 IGKV1-12A0A0C4DH73 117 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 H0YGX0 51 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 NTN3O00634 580 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 IGKV1D-12P01611 117 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 TRGV3P03979 118 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 RPL27AP46776 148 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 DSCR9P59020 149 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 PRNTQ86SH4 94 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 KLHL30-AS1Q8NEE0 82 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 KLF14Q8TD94 323 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 Q9Y3F1 56 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 C22orf24Q9Y442 160 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 MYO15AQ9UKN7 3530 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 SPAG17Q6Q759 2223 aa3.39□□□□□ -1.87
ECHDC1-221ENST00000531582 IGLV4-69A0A075B6H9 119 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGHV4-4A0A075B6R2 117 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGKV1-27A0A075B6S5 117 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGHV1-45A0A0A0MS14 117 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGLV2-11P01706 119 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGHV1-69P01742 117 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 IGKV1-16P04430 117 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 CCL5P13501 91 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 Q5VV11 94 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 C11orf71Q6IPW1 123 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 C14orf178Q8N769 122 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 KIF25-AS1Q9Y6Z4 181 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 DSCAML1Q8TD84 2053 aa3.38□□□□□ -1.87
ECHDC1-221ENST00000531582 CHD7Q9P2D1 2997 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 USP34Q70CQ2 3546 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 C12orf77C9JDV5 145 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 C5orf67F2Z3F1 127 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 LMO4P61968 165 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 ATP1A1-AS1Q5TC04 95 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 ENHOQ6UWT2 76 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 MRPL36Q9P0J6 103 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 C5orf42Q9H799 3197 aa3.37□□□□□ -1.87
ECHDC1-221ENST00000531582 NOTCH4Q99466 2003 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 H3BQ85 93 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 PSCAO43653 123 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 PRCDQ00LT1 54 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 NREPQ16612 68 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 C10orf128Q5T292 105 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 C18orf65Q6ZTR6 163 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 LITAFQ99732 161 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 USF3Q68DE3 2245 aa3.36□□□□□ -1.87
ECHDC1-221ENST00000531582 TRIOO75962 3097 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 IGKV1OR2-108A0A075B7D4 117 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 NDUFB1O75438 58 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 SAA2P0DJI9 122 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 IGHV4-31P0DP07 118 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 PDE6GP18545 87 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 BRWD1-AS2P59051 145 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 TSPEAR-AS2P59090 65 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 C15orf32Q32M92 178 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 CXCL17Q6UXB2 119 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 ZNF702PQ9H963 129 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 XAGE1AQ9HD64 81 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 CACNA1DQ01668 2161 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 KNTC1P50748 2209 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 UNC13CQ8NB66 2214 aa3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 DIDO1Q9BTC0 2240 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-221ENST00000531582 IGLV3-12A0A075B6K2 115 aa3.34□□□□□ -1.87
ECHDC1-221ENST00000531582 IGLV3-9A0A075B6K5 115 aa3.34□□□□□ -1.87
ECHDC1-221ENST00000531582 LHBP01229 141 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms