RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TRAV8-6A0A0B4J262 113 aa12.12□□□□□ -0.47
CTSB-222ENST00000531551 TIRAPP58753 221 aa12.12□□□□□ -0.47
CTSB-222ENST00000531551 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
CTSB-222ENST00000531551 FA2HQ7L5A8 372 aa12.12□□□□□ -0.47
CTSB-222ENST00000531551 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
CTSB-222ENST00000531551 BAGE3Q86Y29 109 aa12.11□□□□□ -0.47
CTSB-222ENST00000531551 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
CTSB-222ENST00000531551 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
CTSB-222ENST00000531551 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
CTSB-222ENST00000531551 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
CTSB-222ENST00000531551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
CTSB-222ENST00000531551 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
CTSB-222ENST00000531551 UBE2L6O14933 153 aa12.1□□□□□ -0.47
CTSB-222ENST00000531551 LY6G6CO95867 125 aa12.1□□□□□ -0.47
CTSB-222ENST00000531551 RNASEKQ6P5S7 137 aaKnown RBP12.1□□□□□ -0.47
CTSB-222ENST00000531551 NIT1Q86X76 327 aa12.1□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 GAGE6Q13070 117 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
CTSB-222ENST00000531551 LINC00614P0C842 121 aa12.08□□□□□ -0.48
CTSB-222ENST00000531551 LAGE3Q14657 143 aa12.08□□□□□ -0.48
CTSB-222ENST00000531551 VPS13DQ5THJ4 4388 aa12.08□□□□□ -0.48
CTSB-222ENST00000531551 RAB5BP61020 215 aa12.08□□□□□ -0.48
CTSB-222ENST00000531551 LGALS9CQ6DKI2 356 aa12.08□□□□□ -0.48
CTSB-222ENST00000531551 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
CTSB-222ENST00000531551 Q0VG73 95 aa12.07□□□□□ -0.48
CTSB-222ENST00000531551 ORMDL2Q53FV1 153 aa12.07□□□□□ -0.48
CTSB-222ENST00000531551 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
CTSB-222ENST00000531551 AP5S1Q9NUS5 200 aa12.07□□□□□ -0.48
CTSB-222ENST00000531551 SIVA1O15304 175 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 ESDP10768 282 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
CTSB-222ENST00000531551 LINC00476Q8WZB0 136 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 UPK3BQ9BT76 320 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 Q9H8V8 135 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 A0A087WX48 190 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
CTSB-222ENST00000531551 K7EMI3 77 aa12.05□□□□□ -0.48
CTSB-222ENST00000531551 Q8N3U1 123 aa12.05□□□□□ -0.48
CTSB-222ENST00000531551 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
CTSB-222ENST00000531551 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
CTSB-222ENST00000531551 AMMECR1LQ6DCA0 310 aa12.04□□□□□ -0.48
CTSB-222ENST00000531551 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
CTSB-222ENST00000531551 PMCHL1Q16048 86 aa12.04□□□□□ -0.48
CTSB-222ENST00000531551 MPV17L2Q567V2 206 aa12.04□□□□□ -0.48
CTSB-222ENST00000531551 ALMS1Q8TCU4 4167 aa12.03□□□□□ -0.48
CTSB-222ENST00000531551 SERF1AO75920 110 aa12.03□□□□□ -0.48
CTSB-222ENST00000531551 Q8N976 141 aa12.03□□□□□ -0.48
CTSB-222ENST00000531551 CHCHD1Q96BP2 118 aaKnown RBP12.03□□□□□ -0.48
CTSB-222ENST00000531551 HSBP1O75506 76 aa12.02□□□□□ -0.48
CTSB-222ENST00000531551 FGF6P10767 208 aa12.02□□□□□ -0.48
CTSB-222ENST00000531551 NDUFA6P56556 154 aa12.02□□□□□ -0.48
CTSB-222ENST00000531551 C2orf66Q6UXQ4 117 aa12.02□□□□□ -0.48
CTSB-222ENST00000531551 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
CTSB-222ENST00000531551 PKIAP61925 76 aa12.02□□□□□ -0.49
CTSB-222ENST00000531551 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
CTSB-222ENST00000531551 H7C423 109 aa12.01□□□□□ -0.49
CTSB-222ENST00000531551 RBX1P62877 108 aa12.01□□□□□ -0.49
CTSB-222ENST00000531551 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
CTSB-222ENST00000531551 DNAH10OSP0CZ25 163 aa12□□□□□ -0.49
CTSB-222ENST00000531551 G0S2P27469 103 aa12□□□□□ -0.49
CTSB-222ENST00000531551 LINC01556Q5JQF7 62 aa12□□□□□ -0.49
CTSB-222ENST00000531551 TMEM101Q96IK0 257 aa12□□□□□ -0.49
CTSB-222ENST00000531551 SACSQ9NZJ4 4579 aa12□□□□□ -0.49
CTSB-222ENST00000531551 NUPR1O60356 82 aa12□□□□□ -0.49
CTSB-222ENST00000531551 LINC00310P59036 64 aa12□□□□□ -0.49
CTSB-222ENST00000531551 UBE2D4Q9Y2X8 147 aa12□□□□□ -0.49
CTSB-222ENST00000531551 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
CTSB-222ENST00000531551 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
CTSB-222ENST00000531551 FAM19A2Q8N3H0 131 aa11.99□□□□□ -0.49
CTSB-222ENST00000531551 M0R2N4 97 aa11.98□□□□□ -0.49
CTSB-222ENST00000531551 HBDP02042 147 aa11.98□□□□□ -0.49
CTSB-222ENST00000531551 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
CTSB-222ENST00000531551 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
CTSB-222ENST00000531551 TRAV9-2A0A087WT02 112 aa11.97□□□□□ -0.49
CTSB-222ENST00000531551 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
CTSB-222ENST00000531551 KLK12Q9UKR0 248 aa11.97□□□□□ -0.49
CTSB-222ENST00000531551 ZNF25P17030 456 aaPredicted RBP11.97□□□□□ -0.49
CTSB-222ENST00000531551 A0A096LNJ9 63 aa11.96□□□□□ -0.49
CTSB-222ENST00000531551 A0A1B0GUV1 79 aa11.96□□□□□ -0.49
CTSB-222ENST00000531551 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.49
CTSB-222ENST00000531551 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
CTSB-222ENST00000531551 SCGB3A1Q96QR1 104 aa11.96□□□□□ -0.49
CTSB-222ENST00000531551 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
CTSB-222ENST00000531551 KMT2AQ03164 3969 aa11.96□□□□□ -0.5
CTSB-222ENST00000531551 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
CTSB-222ENST00000531551 S100A6P06703 90 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 928.1 ms