RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 AP1S3Q96PC3 154 aa8.37□□□□□ -1.07
SSH3-207ENST00000531495 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
SSH3-207ENST00000531495 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 MAP1LC3B2A6NCE7 125 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 C20orf203Q8NBC4 194 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 MAP1LC3BQ9GZQ8 125 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 SMDT1Q9H4I9 107 aa8.36□□□□□ -1.07
SSH3-207ENST00000531495 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
SSH3-207ENST00000531495 MGPP08493 103 aa8.35□□□□□ -1.07
SSH3-207ENST00000531495 SPINK6Q6UWN8 80 aa8.35□□□□□ -1.07
SSH3-207ENST00000531495 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
SSH3-207ENST00000531495 IGKV2-24A0A0C4DH68 120 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 UMAD1C9J7I0 102 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 PRR3P79522 188 aaKnown RBP8.34□□□□□ -1.07
SSH3-207ENST00000531495 STPG4Q8N801 248 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 PKIGQ9Y2B9 76 aa8.34□□□□□ -1.07
SSH3-207ENST00000531495 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
SSH3-207ENST00000531495 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
SSH3-207ENST00000531495 M0QY20 66 aa8.33□□□□□ -1.08
SSH3-207ENST00000531495 PRSS3P2Q8NHM4 247 aa8.33□□□□□ -1.08
SSH3-207ENST00000531495 CYTL1Q9NRR1 136 aa8.33□□□□□ -1.08
SSH3-207ENST00000531495 GAGE12HA6NDE8 117 aa8.32□□□□□ -1.08
SSH3-207ENST00000531495 PAGE4O60829 102 aa8.32□□□□□ -1.08
SSH3-207ENST00000531495 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
SSH3-207ENST00000531495 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
SSH3-207ENST00000531495 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
SSH3-207ENST00000531495 AMTP48728 403 aa8.31□□□□□ -1.08
SSH3-207ENST00000531495 COTL1Q14019 142 aa8.31□□□□□ -1.08
SSH3-207ENST00000531495 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
SSH3-207ENST00000531495 MLST8Q9BVC4 326 aa8.31□□□□□ -1.08
SSH3-207ENST00000531495 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 CACNG7P62955 275 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 SUMO4Q6EEV6 95 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
SSH3-207ENST00000531495 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
SSH3-207ENST00000531495 ODF1Q14990 250 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 Q6ZRP5 223 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 SVBPQ8N300 66 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 FER1L6-AS1Q8NA97 138 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 SFT2D1Q8WV19 159 aa8.29□□□□□ -1.08
SSH3-207ENST00000531495 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
SSH3-207ENST00000531495 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
SSH3-207ENST00000531495 F2Z2F3 143 aa8.28□□□□□ -1.08
SSH3-207ENST00000531495 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
SSH3-207ENST00000531495 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
SSH3-207ENST00000531495 TAGLN2P37802 199 aaKnown RBP8.27□□□□□ -1.09
SSH3-207ENST00000531495 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
SSH3-207ENST00000531495 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
SSH3-207ENST00000531495 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
SSH3-207ENST00000531495 GVQW2A0A096LPI5 108 aaPredicted RBP8.26□□□□□ -1.09
SSH3-207ENST00000531495 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
SSH3-207ENST00000531495 FAM231BA6NCW3 169 aa8.26□□□□□ -1.09
SSH3-207ENST00000531495 SRSF9Q13242 221 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSH3-207ENST00000531495 PEA15Q15121 130 aa8.26□□□□□ -1.09
SSH3-207ENST00000531495 OR2D3Q8NGH3 330 aa8.26□□□□□ -1.09
SSH3-207ENST00000531495 TNXBP22105 4242 aa8.26□□□□□ -1.09
SSH3-207ENST00000531495 A0A096LNI7 61 aa8.25□□□□□ -1.09
SSH3-207ENST00000531495 SNAPINO95295 136 aa8.25□□□□□ -1.09
SSH3-207ENST00000531495 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
SSH3-207ENST00000531495 MBD3L1Q8WWY6 194 aa8.25□□□□□ -1.09
SSH3-207ENST00000531495 TRAV1-1A0A0B4J248 108 aa8.24□□□□□ -1.09
SSH3-207ENST00000531495 A0A1B0GV50 99 aa8.24□□□□□ -1.09
SSH3-207ENST00000531495 H7C423 109 aa8.24□□□□□ -1.09
SSH3-207ENST00000531495 IGLC6P0CF74 106 aa8.24□□□□□ -1.09
SSH3-207ENST00000531495 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
SSH3-207ENST00000531495 FAM213BQ8TBF2 198 aa8.24□□□□□ -1.09
SSH3-207ENST00000531495 IFNA1P01562 189 aa8.23□□□□□ -1.09
SSH3-207ENST00000531495 NTF3P20783 257 aa8.23□□□□□ -1.09
SSH3-207ENST00000531495 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
SSH3-207ENST00000531495 IGHV1-58A0A0C4DH39 117 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 NCR2O95944 276 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 CARD19Q96LW7 228 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
SSH3-207ENST00000531495 H2AFB1P0C5Y9 115 aa8.21□□□□□ -1.1
SSH3-207ENST00000531495 FOXI1Q12951 378 aa8.21□□□□□ -1.1
SSH3-207ENST00000531495 TWIST1Q15672 202 aa8.21□□□□□ -1.1
SSH3-207ENST00000531495 LYZL1Q6UWQ5 148 aa8.21□□□□□ -1.1
SSH3-207ENST00000531495 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
SSH3-207ENST00000531495 APOC3P02656 99 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 APCSP02743 223 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 FGF6P10767 208 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 ZNF25P17030 456 aaPredicted RBP8.2□□□□□ -1.1
SSH3-207ENST00000531495 XCL1P47992 114 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 SMIM15Q7Z3B0 74 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 OR5A1Q8NGJ0 315 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 ISOC2Q96AB3 205 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 SMIM12Q96EX1 92 aa8.2□□□□□ -1.1
SSH3-207ENST00000531495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms