RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SMDT1Q9H4I9 107 aa14.53□□□□□ -0.08
TRAPPC4-210ENST00000531290 HLA-DQA1P01909 254 aa14.52□□□□□ -0.09
TRAPPC4-210ENST00000531290 RBX1P62877 108 aa14.52□□□□□ -0.09
TRAPPC4-210ENST00000531290 CT83Q5H943 113 aa14.52□□□□□ -0.09
TRAPPC4-210ENST00000531290 DEFB104AQ8WTQ1 72 aa14.52□□□□□ -0.09
TRAPPC4-210ENST00000531290 M0QY20 66 aa14.51□□□□□ -0.09
TRAPPC4-210ENST00000531290 CNFNQ9BYD5 112 aa14.51□□□□□ -0.09
TRAPPC4-210ENST00000531290 IGHV1-24A0A0C4DH33 117 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 USP17L23D6RBM5 183 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 SUMO4Q6EEV6 95 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 LINC00269Q8N2A0 174 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 CIRBP-AS1Q8TBR5 109 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 GTSF1Q8WW33 167 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 PGLYRP4Q96LB8 373 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 OSTCQ9NRP0 149 aa14.5□□□□□ -0.09
TRAPPC4-210ENST00000531290 IQCJQ1A5X6 159 aa14.49□□□□□ -0.09
TRAPPC4-210ENST00000531290 RASL11AQ6T310 242 aa14.49□□□□□ -0.09
TRAPPC4-210ENST00000531290 CLPSL2Q6UWE3 100 aa14.49□□□□□ -0.09
TRAPPC4-210ENST00000531290 PRR34Q9NV39 138 aa14.49□□□□□ -0.09
TRAPPC4-210ENST00000531290 NAT8Q9UHE5 227 aa14.48□□□□□ -0.09
TRAPPC4-210ENST00000531290 TSKUQ8WUA8 353 aa14.47□□□□□ -0.09
TRAPPC4-210ENST00000531290 GFRA4Q9GZZ7 299 aa14.47□□□□□ -0.09
TRAPPC4-210ENST00000531290 FAM231BA6NCW3 169 aa14.46□□□□□ -0.09
TRAPPC4-210ENST00000531290 FOXA3P55318 350 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC4-210ENST00000531290 ADIRFQ15847 76 aa14.46□□□□□ -0.09
TRAPPC4-210ENST00000531290 DGAT2L7PQ6IED9 249 aa14.46□□□□□ -0.09
TRAPPC4-210ENST00000531290 NIT2Q9NQR4 276 aa14.46□□□□□ -0.09
TRAPPC4-210ENST00000531290 C9JQL5 133 aa14.45□□□□□ -0.1
TRAPPC4-210ENST00000531290 PRSS1P07477 247 aa14.45□□□□□ -0.1
TRAPPC4-210ENST00000531290 SRSF3P84103 164 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-210ENST00000531290 ISOC2Q96AB3 205 aa14.45□□□□□ -0.1
TRAPPC4-210ENST00000531290 HIGD1CA8MV81 97 aa14.44□□□□□ -0.1
TRAPPC4-210ENST00000531290 KRTAP29-1A8MX34 341 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-210ENST00000531290 RPL23P62829 140 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-210ENST00000531290 REG3AQ06141 175 aa14.44□□□□□ -0.1
TRAPPC4-210ENST00000531290 TMEM243Q9BU79 118 aa14.44□□□□□ -0.1
TRAPPC4-210ENST00000531290 A0A1B0GUT8 65 aa14.43□□□□□ -0.1
TRAPPC4-210ENST00000531290 KRTAP26-1Q6PEX3 210 aa14.42□□□□□ -0.1
TRAPPC4-210ENST00000531290 IGLV10-54A0A075B6I4 117 aa14.41□□□□□ -0.1
TRAPPC4-210ENST00000531290 TRAV8-4A0A0B4J246 113 aa14.41□□□□□ -0.1
TRAPPC4-210ENST00000531290 C9orf163Q8N9P6 203 aa14.41□□□□□ -0.1
TRAPPC4-210ENST00000531290 CLRN3Q8NCR9 226 aa14.41□□□□□ -0.1
TRAPPC4-210ENST00000531290 V9GYV3 84 aa14.41□□□□□ -0.1
TRAPPC4-210ENST00000531290 A0A1B0GUV1 79 aa14.4□□□□□ -0.1
TRAPPC4-210ENST00000531290 UBE2L6O14933 153 aa14.4□□□□□ -0.1
TRAPPC4-210ENST00000531290 RIGQ13278 110 aa14.4□□□□□ -0.1
TRAPPC4-210ENST00000531290 C20orf203Q8NBC4 194 aa14.4□□□□□ -0.1
TRAPPC4-210ENST00000531290 NAT8BQ9UHF3 227 aa14.39□□□□□ -0.11
TRAPPC4-210ENST00000531290 TRAV26-2A0A0B4J265 109 aa14.38□□□□□ -0.11
TRAPPC4-210ENST00000531290 COTL1Q14019 142 aa14.38□□□□□ -0.11
TRAPPC4-210ENST00000531290 GATD1Q8NB37 220 aa14.38□□□□□ -0.11
TRAPPC4-210ENST00000531290 IGLV4-60A0A075B6I1 120 aa14.37□□□□□ -0.11
TRAPPC4-210ENST00000531290 AMTP48728 403 aa14.37□□□□□ -0.11
TRAPPC4-210ENST00000531290 KRTAP10-4P60372 401 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-210ENST00000531290 TMEM191AQ9H0A3 160 aa14.37□□□□□ -0.11
TRAPPC4-210ENST00000531290 NUP35Q8NFH5 326 aa14.36□□□□□ -0.11
TRAPPC4-210ENST00000531290 hDV102S1A0JD36 115 aa14.35□□□□□ -0.11
TRAPPC4-210ENST00000531290 RPL37AP61513 92 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-210ENST00000531290 CLLU1Q5K131 121 aa14.34□□□□□ -0.11
TRAPPC4-210ENST00000531290 SDIM1Q6ZPB5 146 aa14.34□□□□□ -0.11
TRAPPC4-210ENST00000531290 AP5S1Q9NUS5 200 aa14.34□□□□□ -0.11
TRAPPC4-210ENST00000531290 SMIM27A0A1W2PRY6 76 aa14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 OXTP01178 125 aa14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 CNBPP62633 177 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 RPL39LQ96EH5 51 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 MRAP2Q96G30 205 aa14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-210ENST00000531290 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-210ENST00000531290 DPH3Q96FX2 82 aa14.31□□□□□ -0.12
TRAPPC4-210ENST00000531290 A0A1B0GW15 77 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 SDHAF1A6NFY7 115 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 PPP1R2P9O14990 202 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 RAB4AP20338 218 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 PMCHP20382 165 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 PNRC1Q12796 327 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 ST20Q9HBF5 79 aa14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 LRP1Q07954 4544 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-210ENST00000531290 NCR2O95944 276 aa14.29□□□□□ -0.12
TRAPPC4-210ENST00000531290 S100A8P05109 93 aa14.29□□□□□ -0.12
TRAPPC4-210ENST00000531290 CAMPP49913 170 aa14.29□□□□□ -0.12
TRAPPC4-210ENST00000531290 AMMECR1LQ6DCA0 310 aa14.29□□□□□ -0.12
TRAPPC4-210ENST00000531290 AMN1Q8IY45 258 aa14.29□□□□□ -0.12
TRAPPC4-210ENST00000531290 IGHV3-64A0A075B6Q5 118 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 PANO1I0J062 215 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 I3L3M4 83 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 PPP1R17O96001 155 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 CFAP161Q6P656 301 aa14.28□□□□□ -0.12
TRAPPC4-210ENST00000531290 TRBV6-5A0A0K0K1A5 114 aa14.27□□□□□ -0.13
TRAPPC4-210ENST00000531290 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.13
TRAPPC4-210ENST00000531290 APCSP02743 223 aa14.27□□□□□ -0.13
TRAPPC4-210ENST00000531290 FAT3Q8TDW7 4589 aa14.26□□□□□ -0.13
TRAPPC4-210ENST00000531290 MT-ND4LP03901 98 aa14.26□□□□□ -0.13
TRAPPC4-210ENST00000531290 RNF185Q96GF1 192 aa14.26□□□□□ -0.13
TRAPPC4-210ENST00000531290 F8W036 122 aa14.25□□□□□ -0.13
TRAPPC4-210ENST00000531290 SLPIP03973 132 aa14.25□□□□□ -0.13
TRAPPC4-210ENST00000531290 SERTAD4-AS1Q5TG53 156 aa14.25□□□□□ -0.13
TRAPPC4-210ENST00000531290 RNASEKQ6P5S7 137 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-210ENST00000531290 H7C423 109 aa14.24□□□□□ -0.13
TRAPPC4-210ENST00000531290 UQCC3Q6UW78 93 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms